Literature DB >> 11544234

Genome of the bacterium Streptococcus pneumoniae strain R6.

J Hoskins1, W E Alborn, J Arnold, L C Blaszczak, S Burgett, B S DeHoff, S T Estrem, L Fritz, D J Fu, W Fuller, C Geringer, R Gilmour, J S Glass, H Khoja, A R Kraft, R E Lagace, D J LeBlanc, L N Lee, E J Lefkowitz, J Lu, P Matsushima, S M McAhren, M McHenney, K McLeaster, C W Mundy, T I Nicas, F H Norris, M O'Gara, R B Peery, G T Robertson, P Rockey, P M Sun, M E Winkler, Y Yang, M Young-Bellido, G Zhao, C A Zook, R H Baltz, S R Jaskunas, P R Rosteck, P L Skatrud, J I Glass.   

Abstract

Streptococcus pneumoniae is among the most significant causes of bacterial disease in humans. Here we report the 2,038,615-bp genomic sequence of the gram-positive bacterium S. pneumoniae R6. Because the R6 strain is avirulent and, more importantly, because it is readily transformed with DNA from homologous species and many heterologous species, it is the principal platform for investigation of the biology of this important pathogen. It is also used as a primary vehicle for genomics-based development of antibiotics for gram-positive bacteria. In our analysis of the genome, we identified a large number of new uncharacterized genes predicted to encode proteins that either reside on the surface of the cell or are secreted. Among those proteins there may be new targets for vaccine and antibiotic development.

Entities:  

Mesh:

Substances:

Year:  2001        PMID: 11544234      PMCID: PMC95463          DOI: 10.1128/JB.183.19.5709-5717.2001

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  49 in total

1.  Blocks+: a non-redundant database of protein alignment blocks derived from multiple compilations.

Authors:  S Henikoff; J G Henikoff; S Pietrokovski
Journal:  Bioinformatics       Date:  1999-06       Impact factor: 6.937

Review 2.  An embarrassment of sortases - a richness of substrates?

Authors:  M J Pallen; A C Lam; M Antonio; K Dunbar
Journal:  Trends Microbiol       Date:  2001-03       Impact factor: 17.079

3.  Gene expression analysis of the Streptococcus pneumoniae competence regulons by use of DNA microarrays.

Authors:  S Peterson; R T Cline; H Tettelin; V Sharov; D A Morrison
Journal:  J Bacteriol       Date:  2000-11       Impact factor: 3.490

4.  Defects in D-alanyl-lipoteichoic acid synthesis in Streptococcus mutans results in acid sensitivity.

Authors:  D A Boyd; D G Cvitkovitch; A S Bleiweis; M Y Kiriukhin; D V Debabov; F C Neuhaus; I R Hamilton
Journal:  J Bacteriol       Date:  2000-11       Impact factor: 3.490

5.  The NADH oxidase of Streptococcus pneumoniae: its involvement in competence and virulence.

Authors:  I Auzat; S Chapuy-Regaud; G Le Bras; D Dos Santos; A D Ogunniyi; I Le Thomas; J R Garel; J C Paton; M C Trombe
Journal:  Mol Microbiol       Date:  1999-12       Impact factor: 3.501

6.  Consed: a graphical tool for sequence finishing.

Authors:  D Gordon; C Abajian; P Green
Journal:  Genome Res       Date:  1998-03       Impact factor: 9.043

7.  Thermophilin 13, a nontypical antilisterial poration complex bacteriocin, that functions without a receptor.

Authors:  O Marciset; M C Jeronimus-Stratingh; B Mollet; B Poolman
Journal:  J Biol Chem       Date:  1997-05-30       Impact factor: 5.157

8.  A highly conserved repeated DNA element located in the chromosome of Streptococcus pneumoniae.

Authors:  B Martin; O Humbert; M Camara; E Guenzi; J Walker; T Mitchell; P Andrew; M Prudhomme; G Alloing; R Hakenbeck
Journal:  Nucleic Acids Res       Date:  1992-07-11       Impact factor: 16.971

9.  Characterization of glutamine transport in Streptococcus mutans.

Authors:  S G Dashper; P F Riley; E C Reynolds
Journal:  Oral Microbiol Immunol       Date:  1995-06

10.  Cell wall sorting signals in surface proteins of gram-positive bacteria.

Authors:  O Schneewind; D Mihaylova-Petkov; P Model
Journal:  EMBO J       Date:  1993-12       Impact factor: 11.598

View more
  317 in total

1.  Membrane topology of the Streptococcus pneumoniae FtsW division protein.

Authors:  Philippe Gérard; Thierry Vernet; André Zapun
Journal:  J Bacteriol       Date:  2002-04       Impact factor: 3.490

2.  RegR, a global LacI/GalR family regulator, modulates virulence and competence in Streptococcus pneumoniae.

Authors:  Sabine Chapuy-Regaud; A David Ogunniyi; Nicole Diallo; Yvette Huet; Jean-François Desnottes; James C Paton; Sonia Escaich; Marie-Claude Trombe
Journal:  Infect Immun       Date:  2003-05       Impact factor: 3.441

3.  Characterization of a novel fucose-regulated promoter (PfcsK) suitable for gene essentiality and antibacterial mode-of-action studies in Streptococcus pneumoniae.

Authors:  Pan F Chan; Karen M O'Dwyer; Leslie M Palmer; Jennifer D Ambrad; Karen A Ingraham; Chi So; Michael A Lonetto; Sanjoy Biswas; Martin Rosenberg; David J Holmes; Magdalena Zalacain
Journal:  J Bacteriol       Date:  2003-03       Impact factor: 3.490

Review 4.  Biochemistry and comparative genomics of SxxK superfamily acyltransferases offer a clue to the mycobacterial paradox: presence of penicillin-susceptible target proteins versus lack of efficiency of penicillin as therapeutic agent.

Authors:  Colette Goffin; Jean-Marie Ghuysen
Journal:  Microbiol Mol Biol Rev       Date:  2002-12       Impact factor: 11.056

5.  Genome sequence of an M3 strain of Streptococcus pyogenes reveals a large-scale genomic rearrangement in invasive strains and new insights into phage evolution.

Authors:  Ichiro Nakagawa; Ken Kurokawa; Atsushi Yamashita; Masanobu Nakata; Yusuke Tomiyasu; Nobuo Okahashi; Shigetada Kawabata; Kiyoshi Yamazaki; Tadayoshi Shiba; Teruo Yasunaga; Hideo Hayashi; Masahira Hattori; Shigeyuki Hamada
Journal:  Genome Res       Date:  2003-06       Impact factor: 9.043

6.  Activator role of the pneumococcal Mga-like virulence transcriptional regulator.

Authors:  Virtu Solano-Collado; Manuel Espinosa; Alicia Bravo
Journal:  J Bacteriol       Date:  2012-06-01       Impact factor: 3.490

7.  Characterization of central carbon metabolism of Streptococcus pneumoniae by isotopologue profiling.

Authors:  Tobias Härtel; Eva Eylert; Christian Schulz; Lothar Petruschka; Philipp Gierok; Stephanie Grubmüller; Michael Lalk; Wolfgang Eisenreich; Sven Hammerschmidt
Journal:  J Biol Chem       Date:  2011-12-13       Impact factor: 5.157

8.  Contribution of serotype and genetic background to virulence of serotype 3 and serogroup 11 pneumococcal isolates.

Authors:  Lauren J McAllister; Abiodun D Ogunniyi; Uwe H Stroeher; Amanda J Leach; James C Paton
Journal:  Infect Immun       Date:  2011-09-19       Impact factor: 3.441

9.  Predicted functions and linkage specificities of the products of the Streptococcus pneumoniae capsular biosynthetic loci.

Authors:  David M Aanensen; Angeliki Mavroidi; Stephen D Bentley; Peter R Reeves; Brian G Spratt
Journal:  J Bacteriol       Date:  2007-08-31       Impact factor: 3.490

10.  Binding of faropenem and other beta-lactam agents to penicillin-binding proteins of pneumococci with various beta-lactam susceptibilities.

Authors:  Klaudia Kosowska-Shick; Pamela McGhee; Peter C Appelbaum
Journal:  Antimicrob Agents Chemother       Date:  2009-02-23       Impact factor: 5.191

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.