Literature DB >> 16986433

Thermodynamic parameters for calculating the stability of complexes of bridged oligonucleotides.

A A Lomzov1, I A Pyshnaya, E M Ivanova, D V Pyshnyi.   

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Year:  2006        PMID： 16986433     DOI： 10.1134/s1607672906040053

Source DB:  PubMed          Journal:  Dokl Biochem Biophys        ISSN： 1607-6729            Impact factor:   0.788


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  13 in total

1.  Stabilization factors affecting duplex formation of peptide nucleic acid with DNA.

Authors:  N Sugimoto; N Satoh; K Yasuda; S Nakano
Journal:  Biochemistry       Date:  2001-07-24       Impact factor: 3.162

Review 2.  The thermodynamics of DNA structural motifs.

Authors:  John SantaLucia; Donald Hicks
Journal:  Annu Rev Biophys Biomol Struct       Date:  2004

3.  Sequence-dependent thermodynamic parameters for locked nucleic acid (LNA)-DNA duplex formation.

Authors:  Patricia M McTigue; Raymond J Peterson; Jason D Kahn
Journal:  Biochemistry       Date:  2004-05-11       Impact factor: 3.162

4.  Efficiency of coaxial stacking depends on the DNA duplex structure.

Authors:  Dmitrii V Pyshnyi; Eugenii L Goldberg; Eugenia M Ivanova
Journal:  J Biomol Struct Dyn       Date:  2003-12

5.  Thermodynamic parameters for an expanded nearest-neighbor model for formation of RNA duplexes with Watson-Crick base pairs.

Authors:  T Xia; J SantaLucia; M E Burkard; R Kierzek; S J Schroeder; X Jiao; C Cox; D H Turner
Journal:  Biochemistry       Date:  1998-10-20       Impact factor: 3.162

6.  Optical melting of 128 octamer DNA duplexes. Effects of base pair location and nearest neighbors on thermal stability.

Authors:  M J Doktycz; M D Morris; S J Dormady; K L Beattie; K B Jacobson
Journal:  J Biol Chem       Date:  1995-04-14       Impact factor: 5.157

7.  Base-stacking and base-pairing contributions to helix stability: thermodynamics of double-helix formation with CCGG, CCGGp, CCGGAp, ACCGGp, CCGGUp, and ACCGGUp.

Authors:  M Petersheim; D H Turner
Journal:  Biochemistry       Date:  1983-01-18       Impact factor: 3.162

8.  Thermodynamic and spectral properties of DNA miniduplexes with the terminal G x A mispairs and 3' or 5' dangling bases.

Authors:  S G Lokhov; D V Pyshnyi
Journal:  FEBS Lett       Date:  1997-12-29       Impact factor: 4.124

9.  The influence of the non-nucleotide insert on the hybridization properties of oligonucleotides.

Authors:  Inna A Pyshnaya; Dmitrii V Pyshnyi; Alexander A Lomzov; Valentina F Zarytova; Eugenia M Ivanova
Journal:  Nucleosides Nucleotides Nucleic Acids       Date:  2004-10       Impact factor: 1.381

10.  Design of nucleic acid sequences for DNA computing based on a thermodynamic approach.

Authors:  Fumiaki Tanaka; Atsushi Kameda; Masahito Yamamoto; Azuma Ohuchi
Journal:  Nucleic Acids Res       Date:  2005-02-08       Impact factor: 16.971
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  2 in total

1.  Pairing nanoarchitectonics of oligodeoxyribonucleotides with complex diversity: concatemers and self-limited complexes.

Authors:  Anastasia A Zamoskovtseva; Victor M Golyshev; Valeria A Kizilova; Georgiy Yu Shevelev; Dmitrii V Pyshnyi; Alexander A Lomzov
Journal:  RSC Adv       Date:  2022-02-23       Impact factor: 3.361

2.  Thermodynamic Swings: How Ideal Complex of Cas9-RNA/DNA Forms.

Authors:  Polina V Zhdanova; Alexander A Lomzov; Daria V Prokhorova; Grigory A Stepanov; Alexander A Chernonosov; Vladimir V Koval
Journal:  Int J Mol Sci       Date:  2022-08-10       Impact factor: 6.208
  2 in total

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