Literature DB >> 16984999

Crystal structure and activities of EXPB1 (Zea m 1), a beta-expansin and group-1 pollen allergen from maize.

Neela H Yennawar1, Lian-Chao Li, David M Dudzinski, Akira Tabuchi, Daniel J Cosgrove.   

Abstract

Expansins are small extracellular proteins that promote turgor-driven extension of plant cell walls. EXPB1 (also called Zea m 1) is a member of the beta-expansin subfamily known in the allergen literature as group-1 grass pollen allergens. EXPB1 induces extension and stress relaxation of grass cell walls. To help elucidate expansin's mechanism of wall loosening, we determined the structure of EXPB1 by x-ray crystallography to 2.75-A resolution. EXPB1 consists of two domains closely packed and aligned so as to form a long, shallow groove with potential to bind a glycan backbone of approximately 10 sugar residues. The structure of EXPB1 domain 1 resembles that of family-45 glycoside hydrolase (GH45), with conservation of most of the residues in the catalytic site. However, EXPB1 lacks a second aspartate that serves as the catalytic base required for hydrolytic activity in GH45 enzymes. Domain 2 of EXPB1 is an Ig-like beta-sandwich, with aromatic and polar residues that form a potential surface for polysaccharide binding in line with the glycan binding cleft of domain 1. EXPB1 binds to maize cell walls, most strongly to xylans, causing swelling of the cell wall. Tests for hydrolytic activity by EXPB1 with various wall polysaccharides proved negative. Moreover, GH45 enzymes and a GH45-related protein called "swollenin" lacked wall extension activity comparable to that of expansins. We propose a model of expansin action in which EXPB1 facilitates the local movement and stress relaxation of arabinoxylan-cellulose networks within the wall by noncovalent rearrangement of its target.

Entities:  

Mesh:

Substances:

Year:  2006        PMID: 16984999      PMCID: PMC1595409          DOI: 10.1073/pnas.0605979103

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  65 in total

1.  The Protein Data Bank.

Authors:  H M Berman; J Westbrook; Z Feng; G Gilliland; T N Bhat; H Weissig; I N Shindyalov; P E Bourne
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

Review 2.  The molecular basis of plant cell wall extension.

Authors:  C P Darley; A M Forrester; S J McQueen-Mason
Journal:  Plant Mol Biol       Date:  2001-09       Impact factor: 4.076

3.  Plant expansins are a complex multigene family with an ancient evolutionary origin.

Authors:  Yi Li; Catherine P Darley; Verónica Ongaro; Andrew Fleming; Ori Schipper; Sandra L Baldauf; Simon J McQueen-Mason
Journal:  Plant Physiol       Date:  2002-03       Impact factor: 8.340

4.  Regulation of expansin gene expression affects growth and development in transgenic rice plants.

Authors:  Dongsu Choi; Yi Lee; Hyung-Taeg Cho; Hans Kende
Journal:  Plant Cell       Date:  2003-06       Impact factor: 11.277

5.  Structural characterisation and functional significance of transient protein-protein interactions.

Authors:  Irene M A Nooren; Janet M Thornton
Journal:  J Mol Biol       Date:  2003-01-31       Impact factor: 5.469

6.  Gain of structure and IgE epitopes by eukaryotic expression of the major Timothy grass pollen allergen, Phl p 1.

Authors:  Tanja Ball; William Edstrom; Ludwig Mauch; Jacky Schmitt; Bernd Leistler; Helmut Fiebig; Wolfgang R Sperr; Alexander W Hauswirth; Peter Valent; Dietrich Kraft; Steven C Almo; Rudolf Valenta
Journal:  FEBS J       Date:  2005-01       Impact factor: 5.542

Review 7.  Characteristics and immunobiology of grass pollen allergens.

Authors:  Kerstin Andersson; Jonas Lidholm
Journal:  Int Arch Allergy Immunol       Date:  2003-02       Impact factor: 2.749

8.  Studies on the carbohydrate moieties of the timothy grass pollen allergen Phl p I.

Authors:  A Petersen; W M Becker; H Moll; M Blümke; M Schlaak
Journal:  Electrophoresis       Date:  1995-05       Impact factor: 3.535

9.  Maize tapetum xylanase is synthesized as a precursor, processed and activated by a serine protease, and deposited on the pollen.

Authors:  Sherry S H Wu; Der Fen Suen; Han Chang Chang; Anthony H C Huang
Journal:  J Biol Chem       Date:  2002-10-03       Impact factor: 5.157

10.  Structure and function of endoglucanase V.

Authors:  G J Davies; G G Dodson; R E Hubbard; S P Tolley; Z Dauter; K S Wilson; C Hjort; J M Mikkelsen; G Rasmussen; M Schülein
Journal:  Nature       Date:  1993-09-23       Impact factor: 49.962

View more
  71 in total

1.  Phototropism: mechanism and outcomes.

Authors:  Ullas V Pedmale; R Brandon Celaya; Emmanuel Liscum
Journal:  Arabidopsis Book       Date:  2010-08-31

2.  Over-expression of the cucumber expansin gene (Cs-EXPA1) in transgenic maize seed for cellulose deconstruction.

Authors:  Sangwoong Yoon; Shivakumar P Devaiah; Seo-eun Choi; Jeff Bray; Robert Love; Jeffrey Lane; Carol Drees; John H Howard; Elizabeth E Hood
Journal:  Transgenic Res       Date:  2015-12-28       Impact factor: 2.788

3.  Origin and Functional Prediction of Pollen Allergens in Plants.

Authors:  Miaolin Chen; Jie Xu; Deborah Devis; Jianxin Shi; Kang Ren; Iain Searle; Dabing Zhang
Journal:  Plant Physiol       Date:  2016-07-19       Impact factor: 8.340

Review 4.  Bacterial expansins and related proteins from the world of microbes.

Authors:  Nikolaos Georgelis; Nikolas Nikolaidis; Daniel J Cosgrove
Journal:  Appl Microbiol Biotechnol       Date:  2015-04-02       Impact factor: 4.813

5.  Profile of Daniel J. Cosgrove.

Authors:  Tinsley H Davis
Journal:  Proc Natl Acad Sci U S A       Date:  2006-09-26       Impact factor: 11.205

6.  Recent proliferation and translocation of pollen group 1 allergen genes in the maize genome.

Authors:  Elene R Valdivia; Javier Sampedro; Jonathan C Lamb; Surinder Chopra; Daniel J Cosgrove
Journal:  Plant Physiol       Date:  2007-01-12       Impact factor: 8.340

Review 7.  Allergen structures and biologic functions: the cutting edge of allergy research.

Authors:  Anna Pomés
Journal:  Curr Allergy Asthma Rep       Date:  2008-09       Impact factor: 4.806

Review 8.  Thermostable enzymes as biocatalysts in the biofuel industry.

Authors:  Carl J Yeoman; Yejun Han; Dylan Dodd; Charles M Schroeder; Roderick I Mackie; Isaac K O Cann
Journal:  Adv Appl Microbiol       Date:  2010-03-06       Impact factor: 5.086

9.  Class B beta-expansins are needed for pollen separation and stigma penetration.

Authors:  Elene R Valdivia; Andrew G Stephenson; Daniel M Durachko; Daniel Cosgrove
Journal:  Sex Plant Reprod       Date:  2009-06-04

10.  Structure-function analysis of the bacterial expansin EXLX1.

Authors:  Nikolaos Georgelis; Akira Tabuchi; Nikolas Nikolaidis; Daniel J Cosgrove
Journal:  J Biol Chem       Date:  2011-03-24       Impact factor: 5.157

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.