Literature DB >> 16980459

Structural investigations of the membrane-embedded rotor ring of the F-ATPase from Clostridium paradoxum.

Thomas Meier1, Scott A Ferguson, Gregory M Cook, Peter Dimroth, Janet Vonck.   

Abstract

The Na(+)-translocating F-ATPase of the thermoalkaliphilic bacterium Clostridium paradoxum harbors an oligomeric ring of c subunits that resists dissociation by sodium dodecyl sulfate. The c ring has been isolated and crystallized in two dimensions. From electron microscopy of these c-ring crystals, a projection map was calculated to 7 A resolution. In the projection map, each c ring consists of two concentric, slightly staggered, packed rings, each composed of 11 densities representing the alpha-helices. On the basis of these results, it was determined that the F-ATPase from C. paradoxum contains an undecameric c ring.

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Year:  2006        PMID: 16980459      PMCID: PMC1636304          DOI: 10.1128/JB.00934-06

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  17 in total

1.  Parameters affecting specimen flatness of two-dimensional crystals for electron crystallography.

Authors:  J Vonck
Journal:  Ultramicroscopy       Date:  2000-11       Impact factor: 2.689

2.  Structure of the rotor of the V-Type Na+-ATPase from Enterococcus hirae.

Authors:  Takeshi Murata; Ichiro Yamato; Yoshimi Kakinuma; Andrew G W Leslie; John E Walker
Journal:  Science       Date:  2005-03-31       Impact factor: 47.728

3.  Biochemical and molecular characterization of a Na+-translocating F1Fo-ATPase from the thermoalkaliphilic bacterium Clostridium paradoxum.

Authors:  Scott A Ferguson; Stefanie Keis; Gregory M Cook
Journal:  J Bacteriol       Date:  2006-07       Impact factor: 3.490

4.  The Intracellular pH of Clostridium paradoxum, an Anaerobic, Alkaliphilic, and Thermophilic Bacterium.

Authors:  G M Cook; J B Russell; A Reichert; J Wiegel
Journal:  Appl Environ Microbiol       Date:  1996-12       Impact factor: 4.792

5.  Tricine-sodium dodecyl sulfate-polyacrylamide gel electrophoresis for the separation of proteins in the range from 1 to 100 kDa.

Authors:  H Schägger; G von Jagow
Journal:  Anal Biochem       Date:  1987-11-01       Impact factor: 3.365

6.  A simple modification of Blum's silver stain method allows for 30 minute detection of proteins in polyacrylamide gels.

Authors:  M V Nesterenko; M Tilley; S J Upton
Journal:  J Biochem Biophys Methods       Date:  1994-04

7.  Structure of the rotor ring of F-Type Na+-ATPase from Ilyobacter tartaricus.

Authors:  Thomas Meier; Patrick Polzer; Kay Diederichs; Wolfram Welte; Peter Dimroth
Journal:  Science       Date:  2005-04-29       Impact factor: 47.728

8.  Bacterial Na(+)-ATP synthase has an undecameric rotor.

Authors:  H Stahlberg; D J Müller; K Suda; D Fotiadis; A Engel; T Meier; U Matthey; P Dimroth
Journal:  EMBO Rep       Date:  2001-03       Impact factor: 8.807

9.  Molecular architecture of the undecameric rotor of a bacterial Na+-ATP synthase.

Authors:  Janet Vonck; Tassilo Krug von Nidda; Thomas Meier; Ulrich Matthey; Deryck J Mills; Werner Kühlbrandt; Peter Dimroth
Journal:  J Mol Biol       Date:  2002-08-09       Impact factor: 5.469

10.  Measurement of protein using bicinchoninic acid.

Authors:  P K Smith; R I Krohn; G T Hermanson; A K Mallia; F H Gartner; M D Provenzano; E K Fujimoto; N M Goeke; B J Olson; D C Klenk
Journal:  Anal Biochem       Date:  1985-10       Impact factor: 3.365

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  24 in total

1.  Constant c10 ring stoichiometry in the Escherichia coli ATP synthase analyzed by cross-linking.

Authors:  Britta Ballhausen; Karlheinz Altendorf; Gabriele Deckers-Hebestreit
Journal:  J Bacteriol       Date:  2009-01-30       Impact factor: 3.490

2.  Three-dimensional structure of A1A0 ATP synthase from the hyperthermophilic archaeon Pyrococcus furiosus by electron microscopy.

Authors:  Janet Vonck; Kim Y Pisa; Nina Morgner; Bernhard Brutschy; Volker Müller
Journal:  J Biol Chem       Date:  2009-02-08       Impact factor: 5.157

3.  On the principle of ion selectivity in Na+/H+-coupled membrane proteins: experimental and theoretical studies of an ATP synthase rotor.

Authors:  Vanessa Leone; Denys Pogoryelov; Thomas Meier; José D Faraldo-Gómez
Journal:  Proc Natl Acad Sci U S A       Date:  2015-02-23       Impact factor: 11.205

4.  Energy Conservation Associated with Ethanol Formation from H2 and CO2 in Clostridium autoethanogenum Involving Electron Bifurcation.

Authors:  Johanna Mock; Yanning Zheng; Alexander P Mueller; San Ly; Loan Tran; Simon Segovia; Shilpa Nagaraju; Michael Köpke; Peter Dürre; Rudolf K Thauer
Journal:  J Bacteriol       Date:  2015-07-06       Impact factor: 3.490

5.  Clostridium ljungdahlii represents a microbial production platform based on syngas.

Authors:  Michael Köpke; Claudia Held; Sandra Hujer; Heiko Liesegang; Arnim Wiezer; Antje Wollherr; Armin Ehrenreich; Wolfgang Liebl; Gerhard Gottschalk; Peter Dürre
Journal:  Proc Natl Acad Sci U S A       Date:  2010-07-02       Impact factor: 11.205

Review 6.  F1F0-ATP synthases of alkaliphilic bacteria: lessons from their adaptations.

Authors:  David B Hicks; Jun Liu; Makoto Fujisawa; Terry A Krulwich
Journal:  Biochim Biophys Acta       Date:  2010-03-01

7.  The c-ring stoichiometry of ATP synthase is adapted to cell physiological requirements of alkaliphilic Bacillus pseudofirmus OF4.

Authors:  Laura Preiss; Adriana L Klyszejko; David B Hicks; Jun Liu; Oliver J Fackelmayer; Özkan Yildiz; Terry A Krulwich; Thomas Meier
Journal:  Proc Natl Acad Sci U S A       Date:  2013-04-23       Impact factor: 11.205

8.  A new type of proton coordination in an F(1)F(o)-ATP synthase rotor ring.

Authors:  Laura Preiss; Ozkan Yildiz; David B Hicks; Terry A Krulwich; Thomas Meier
Journal:  PLoS Biol       Date:  2010-08-03       Impact factor: 8.029

9.  Structure of the c14 rotor ring of the proton translocating chloroplast ATP synthase.

Authors:  Melanie Vollmar; Daniel Schlieper; Martyn Winn; Claudia Büchner; Georg Groth
Journal:  J Biol Chem       Date:  2009-05-07       Impact factor: 5.157

10.  Resolving the negative potential side (n-side) water-accessible proton pathway of F-type ATP synthase by molecular dynamics simulations.

Authors:  Holger Gohlke; Daniel Schlieper; Georg Groth
Journal:  J Biol Chem       Date:  2012-08-31       Impact factor: 5.157

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