Literature DB >> 16967960

Microsolvation of formamide: a rotational study.

Susana Blanco1, Juan C López, Alberto Lesarri, José L Alonso.   

Abstract

Microsolvated formamide clusters have been generated in a supersonic jet expansion and characterized using Fourier transform microwave spectroscopy. Three conformers of the monohydrated cluster and one of the dihydrated complex have been observed. Seven monosubstituted isotopic species have been measured for the most stable conformer of formamide...H(2)O, which adopts a closed planar ring structure stabilized by two intermolecular hydrogen bonds (N-H...O(H)-H...O=C). The two higher energy forms of formamide...H(2)O have been observed for the first time. The second most stable conformer is stabilized by a O-H...O=C and a weak C-H...O hydrogen bond, while, in the less stable form, water accepts a hydrogen bond from the anti hydrogen of the amino group. For formamide...(H(2)O)(2), the parent and nine monosubstituted isotopic species have been observed. In this cluster the two water molecules close a cycle with the amide group through three intermolecular hydrogen bonds (N-H...O(H)-H...O(H)-H...O=C), the nonbonded hydrogen atoms of water adopting an up-down configuration. Substitution (r(s)) and effective (r(0)) structures have been determined for formamide, the most stable form of formamide...H(2)O and formamide...(H(2)O)(2). The results on monohydrated formamide clusters can help to explain the observed preferences of bound water in proteins. Clear evidence of sigma-bond cooperativity effects emerges when comparing the structures of the mono- and dihydrated formamide clusters. No detectable structural changes due to pi-bond cooperativity are observed on formamide upon hydration.

Entities:  

Year:  2006        PMID: 16967960     DOI: 10.1021/ja0618393

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  6 in total

1.  Revealing the multiple structures of serine.

Authors:  Susana Blanco; M Eugenia Sanz; Juan C López; José L Alonso
Journal:  Proc Natl Acad Sci U S A       Date:  2007-12-12       Impact factor: 11.205

2.  Observations of interstellar formamide: availability of a prebiotic precursor in the galactic habitable zone.

Authors:  Gilles R Adande; Neville J Woolf; Lucy M Ziurys
Journal:  Astrobiology       Date:  2013-05-08       Impact factor: 4.335

3.  Cooperativity of intermolecular hydrogen bonds in microsolvated DMSO and DMF clusters: a DFT, AIM, and NCI analysis.

Authors:  Natarajan Sathiyamoorthy Venkataramanan
Journal:  J Mol Model       Date:  2016-06-08       Impact factor: 1.810

4.  Amyloid fibrillation of insulin under water-limited conditions.

Authors:  Tae Su Choi; Jong Wha Lee; Kyeong Sik Jin; Hugh I Kim
Journal:  Biophys J       Date:  2014-10-21       Impact factor: 4.033

5.  Dipole moments of conjugated donor-acceptor substituted systems: calculations vs. experiments.

Authors:  Vladimir Lokshin; Mark Sigalov; Nina Larina; Vladimir Khodorkovsky
Journal:  RSC Adv       Date:  2021-01-04       Impact factor: 3.361

6.  Exploring Peptide⁻Solvent Interactions: A Computational Study.

Authors:  Nadia Elghobashi-Meinhardt
Journal:  Molecules       Date:  2018-09-14       Impact factor: 4.411

  6 in total

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