Literature DB >> 16965024

Characterization of spectral diffusion from two-dimensional line shapes.

Sean T Roberts1, Joseph J Loparo, Andrei Tokmakoff.   

Abstract

The analysis of line shapes in two-dimensional optical and infrared spectroscopies is a powerful approach to characterizing the dynamics of molecules in the condensed phase. Changes in line shape from diagonally elongated to symmetric as a function of waiting time arise from evolution of the transition frequency. We describe a number of quantitative measures of frequency fluctuations and spectral diffusion through the analysis of two-dimensional (2D) line shapes. These metrics are identical to the system's frequency correlation function and independent of population relaxation in the limit of a short time approximation for the 2D response. We also test the broader applicability of these expressions for analyzing three-level vibrational systems and experiments with finite pulses.

Year:  2006        PMID: 16965024     DOI: 10.1063/1.2232271

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  31 in total

1.  2D IR spectroscopy reveals the role of water in the binding of channel-blocking drugs to the influenza M2 channel.

Authors:  Ayanjeet Ghosh; Jun Wang; Yurii S Moroz; Ivan V Korendovych; Martin Zanni; William F DeGrado; Feng Gai; Robin M Hochstrasser
Journal:  J Chem Phys       Date:  2014-06-21       Impact factor: 3.488

2.  Line shape analysis of two-dimensional infrared spectra.

Authors:  Qi Guo; Philip Pagano; Yun-Liang Li; Amnon Kohen; Christopher M Cheatum
Journal:  J Chem Phys       Date:  2015-06-07       Impact factor: 3.488

3.  Vibrational coherence and energy transfer in two-dimensional spectra with the optimized mean-trajectory approximation.

Authors:  Mallory Alemi; Roger F Loring
Journal:  J Chem Phys       Date:  2015-06-07       Impact factor: 3.488

4.  Nonlinear two-dimensional terahertz photon echo and rotational spectroscopy in the gas phase.

Authors:  Jian Lu; Yaqing Zhang; Harold Y Hwang; Benjamin K Ofori-Okai; Sharly Fleischer; Keith A Nelson
Journal:  Proc Natl Acad Sci U S A       Date:  2016-10-04       Impact factor: 11.205

Review 5.  Watching Proteins Wiggle: Mapping Structures with Two-Dimensional Infrared Spectroscopy.

Authors:  Ayanjeet Ghosh; Joshua S Ostrander; Martin T Zanni
Journal:  Chem Rev       Date:  2017-01-06       Impact factor: 60.622

6.  An alternative structural isoform in amyloid-like aggregates formed from thermally denatured human γD-crystallin.

Authors:  Sean D Moran; Tianqi O Zhang; Martin T Zanni
Journal:  Protein Sci       Date:  2014-02-04       Impact factor: 6.725

7.  Tidal surge in the M2 proton channel, sensed by 2D IR spectroscopy.

Authors:  Ayanjeet Ghosh; Jade Qiu; William F DeGrado; Robin M Hochstrasser
Journal:  Proc Natl Acad Sci U S A       Date:  2011-03-28       Impact factor: 11.205

8.  Time-dependent fifth-order bands in nominally third-order 2D IR vibrational echo spectra.

Authors:  Megan C Thielges; Michael D Fayer
Journal:  J Phys Chem A       Date:  2011-06-07       Impact factor: 2.781

9.  Hydrogen bonding and Raman, IR, and 2D-IR spectroscopy of dilute HOD in liquid D2O.

Authors:  B Auer; R Kumar; J R Schmidt; J L Skinner
Journal:  Proc Natl Acad Sci U S A       Date:  2007-06-18       Impact factor: 11.205

10.  Infrared and Fluorescence Assessment of Protein Dynamics: From Folding to Function.

Authors:  Bei Ding; Mary Rose Hilaire; Feng Gai
Journal:  J Phys Chem B       Date:  2016-05-25       Impact factor: 2.991

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