Literature DB >> 16962767

Towards neural circuit reconstruction with volume electron microscopy techniques.

Kevin L Briggman1, Winfried Denk.   

Abstract

Electron microscopy is the only currently available technique with a resolution adequate to identify and follow every axon and dendrite in dense neuropil. Reconstructions of large volumes of neural tissue, necessary to reconstruct even local neural circuits, have, however, been inhibited by the daunting task of serially sectioning and reconstructing thousands of sections. Recent technological developments have improved the quality of volume electron microscopy data and automated its acquisition. This opens up the prospect of reconstructing almost complete invertebrate and sizable fractions of vertebrate nervous systems. Such reconstructions of complete neural wiring diagrams could rekindle the tradition of relating neural function to the underlying neuroanatomical circuitry.

Mesh:

Year:  2006        PMID: 16962767     DOI: 10.1016/j.conb.2006.08.010

Source DB:  PubMed          Journal:  Curr Opin Neurobiol        ISSN: 0959-4388            Impact factor:   6.627


  99 in total

Review 1.  The Cadherin Superfamily in Neural Circuit Assembly.

Authors:  James D Jontes
Journal:  Cold Spring Harb Perspect Biol       Date:  2018-07-02       Impact factor: 10.005

Review 2.  Large-scale automated histology in the pursuit of connectomes.

Authors:  David Kleinfeld; Arjun Bharioke; Pablo Blinder; Davi D Bock; Kevin L Briggman; Dmitri B Chklovskii; Winfried Denk; Moritz Helmstaedter; John P Kaufhold; Wei-Chung Allen Lee; Hanno S Meyer; Kristina D Micheva; Marcel Oberlaender; Steffen Prohaska; R Clay Reid; Stephen J Smith; Shinya Takemura; Philbert S Tsai; Bert Sakmann
Journal:  J Neurosci       Date:  2011-11-09       Impact factor: 6.167

3.  A Bayesian compressed-sensing approach for reconstructing neural connectivity from subsampled anatomical data.

Authors:  Yuriy Mishchenko; Liam Paninski
Journal:  J Comput Neurosci       Date:  2012-03-22       Impact factor: 1.621

4.  Detection of neuron membranes in electron microscopy images using multi-scale context and radon-like features.

Authors:  Mojtaba Seyedhosseini; Ritwik Kumar; Elizabeth Jurrus; Rick Giuly; Mark Ellisman; Hanspeter Pfister; Tolga Tasdizen
Journal:  Med Image Comput Comput Assist Interv       Date:  2011

5.  Topologically correct reconstruction of tortuous contour forests.

Authors:  John Edwards; Chandrajit Bajaj
Journal:  Comput Aided Des       Date:  2011-10-01       Impact factor: 3.027

Review 6.  Circuit reconstruction tools today.

Authors:  Stephen J Smith
Journal:  Curr Opin Neurobiol       Date:  2007-12-21       Impact factor: 6.627

Review 7.  Genetic dissection of neural circuits.

Authors:  Liqun Luo; Edward M Callaway; Karel Svoboda
Journal:  Neuron       Date:  2008-03-13       Impact factor: 17.173

8.  The network and the synapse: 100 years after Cajal.

Authors:  Ashesh Dhawale; Upinder S Bhalla
Journal:  HFSP J       Date:  2008-01-30

9.  Watershed Merge Tree Classification for Electron Microscopy Image Segmentation.

Authors:  Ting Liu; Elizabeth Jurrus; Mojtaba Seyedhosseini; Mark Ellisman; Tolga Tasdizen
Journal:  Proc IAPR Int Conf Pattern Recogn       Date:  2012-11

10.  WATERSHED MERGE FOREST CLASSIFICATION FOR ELECTRON MICROSCOPY IMAGE STACK SEGMENTATION.

Authors:  Ting Liu; Mojtaba Seyedhosseini; Mark Ellisman; Tolga Tasdizen
Journal:  Proc IEEE Int Conf Comput Vis       Date:  2013-09
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