Literature DB >> 16962159

Structure-activity analysis of base and enzyme-catalyzed 4-hydroxybenzoyl coenzyme A hydrolysis.

Feng Song1, Zhihao Zhuang, Debra Dunaway-Mariano.   

Abstract

In this study, the second-order rate constant k2 of base-catalyzed hydrolysis and the values of kcat, Km and kcat/Km of wild-type Pseudomonas sp. CBS3 4-hydroxybenzoyl coenzyme A (4-HBA-CoA) thioesterase-catalyzed hydrolysis of 4-HBA-CoA and its para-substituted analogs were measured. For the base-catalyzed hydrolysis, the plot of logk2 vs the sigma value of the para-substituents was linear with a slope (rho) of 1.5. In the case of the enzyme-catalyzed hydrolysis, the kcat/Km values measured for the para-substituted analogs defined substrate specificity. Asp32 was shown to play a key role in substrate recognition, and in particular, in the discrimination between the targeted substrate and other cellular benzoyl-CoA thioesters.

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Year:  2006        PMID: 16962159     DOI: 10.1016/j.bioorg.2006.07.002

Source DB:  PubMed          Journal:  Bioorg Chem        ISSN: 0045-2068            Impact factor:   5.275


  4 in total

1.  The catalytic mechanism of the hotdog-fold enzyme superfamily 4-hydroxybenzoyl-CoA thioesterase from Arthrobacter sp. strain SU.

Authors:  Feng Song; James B Thoden; Zhihao Zhuang; John Latham; Michael Trujillo; Hazel M Holden; Debra Dunaway-Mariano
Journal:  Biochemistry       Date:  2012-08-20       Impact factor: 3.162

2.  Structural and biochemical studies of a fluoroacetyl-CoA-specific thioesterase reveal a molecular basis for fluorine selectivity.

Authors:  Amy M Weeks; Scott M Coyle; Martin Jinek; Jennifer A Doudna; Michelle C Y Chang
Journal:  Biochemistry       Date:  2010-11-02       Impact factor: 3.162

Review 3.  Active site comparisons and catalytic mechanisms of the hot dog superfamily.

Authors:  Jason W Labonte; Craig A Townsend
Journal:  Chem Rev       Date:  2012-12-03       Impact factor: 60.622

4.  A dedicated thioesterase of the Hotdog-fold family is required for the biosynthesis of the naphthoquinone ring of vitamin K1.

Authors:  Joshua R Widhalm; Chloë van Oostende; Fabienne Furt; Gilles J C Basset
Journal:  Proc Natl Acad Sci U S A       Date:  2009-03-25       Impact factor: 11.205

  4 in total

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