Literature DB >> 16957078

Deciphering the spike train of a sensory neuron: counts and temporal patterns in the rat whisker pathway.

Ehsan Arabzadeh1, Stefano Panzeri, Mathew E Diamond.   

Abstract

Rats achieve remarkable texture discriminations by sweeping their facial whiskers along surfaces. This work explores how neurons at two levels of the sensory pathway, trigeminal ganglion and barrel cortex, carry information about such stimuli. We identified two biologically plausible coding mechanisms, spike counts and patterns, and used "mutual information" to quantify how reliably neurons in anesthetized rats reported texture when "decoded" according to these candidate mechanisms. For discriminations between surfaces of different coarseness, spike counts could be decoded reliably and rapidly (within 30 ms after stimulus onset in cortex). Information increased as responses were considered as spike patterns with progressively finer temporal precision. At highest temporal resolution (spike sequences across six bins of 4 ms), the quantity of "information" in patterns rose 150% for ganglion neurons and 110% for cortical neurons above that in spike counts. In some cases, patterns permitted discriminations not supported by spike counts alone.

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Year:  2006        PMID: 16957078      PMCID: PMC6674492          DOI: 10.1523/JNEUROSCI.1491-06.2006

Source DB:  PubMed          Journal:  J Neurosci        ISSN: 0270-6474            Impact factor:   6.167


  39 in total

1.  Examination of the spatial and temporal distribution of sensory cortical activity using a 100-electrode array.

Authors:  P J Rousche; R S Petersen; S Battiston; S Giannotta; M E Diamond
Journal:  J Neurosci Methods       Date:  1999-08-01       Impact factor: 2.390

Review 2.  Information theory and neural coding.

Authors:  A Borst; F E Theunissen
Journal:  Nat Neurosci       Date:  1999-11       Impact factor: 24.884

3.  The neurophysiology of backward visual masking: information analysis.

Authors:  E T Rolls; M J Tovée; S Panzeri
Journal:  J Cogn Neurosci       Date:  1999-05       Impact factor: 3.225

4.  Cortical representation of auditory space: information-bearing features of spike patterns.

Authors:  Shigeto Furukawa; John C Middlebrooks
Journal:  J Neurophysiol       Date:  2002-04       Impact factor: 2.714

5.  Importance of temporal cues for tactile spatial- frequency discrimination.

Authors:  E Gamzu; E Ahissar
Journal:  J Neurosci       Date:  2001-09-15       Impact factor: 6.167

6.  Neural computations that underlie decisions about sensory stimuli.

Authors:  J I. Gold; M N. Shadlen
Journal:  Trends Cogn Sci       Date:  2001-01-01       Impact factor: 20.229

7.  Mice can learn roughness discrimination with vibrissae in a jump stand apparatus.

Authors:  A Cybulska-Klosowicz; M Kossut
Journal:  Acta Neurobiol Exp (Wars)       Date:  2001       Impact factor: 1.579

8.  The role of spike timing in the coding of stimulus location in rat somatosensory cortex.

Authors:  S Panzeri; R S Petersen; S R Schultz; M Lebedev; M E Diamond
Journal:  Neuron       Date:  2001-03       Impact factor: 17.173

9.  Spatial-temporal distribution of whisker-evoked activity in rat somatosensory cortex and the coding of stimulus location.

Authors:  R S Petersen; M E Diamond
Journal:  J Neurosci       Date:  2000-08-15       Impact factor: 6.167

10.  Population coding of stimulus location in rat somatosensory cortex.

Authors:  R S Petersen; S Panzeri; M E Diamond
Journal:  Neuron       Date:  2001-11-08       Impact factor: 17.173

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  73 in total

1.  A quantitative analysis of information about past and present stimuli encoded by spikes of A1 neurons.

Authors:  Stefan Klampfl; Stephen V David; Pingbo Yin; Shihab A Shamma; Wolfgang Maass
Journal:  J Neurophysiol       Date:  2012-06-13       Impact factor: 2.714

2.  Millisecond encoding precision of auditory cortex neurons.

Authors:  Christoph Kayser; Nikos K Logothetis; Stefano Panzeri
Journal:  Proc Natl Acad Sci U S A       Date:  2010-09-13       Impact factor: 11.205

3.  Recoding of sensory information across the retinothalamic synapse.

Authors:  Xin Wang; Judith A Hirsch; Friedrich T Sommer
Journal:  J Neurosci       Date:  2010-10-13       Impact factor: 6.167

4.  Neural encoding schemes of tactile information in afferent activity of the vibrissal system.

Authors:  Fernando D Farfán; Ana L Albarracín; Carmelo J Felice
Journal:  J Comput Neurosci       Date:  2012-06-22       Impact factor: 1.621

5.  Computational role of large receptive fields in the primary somatosensory cortex.

Authors:  Guglielmo Foffani; John K Chapin; Karen A Moxon
Journal:  J Neurophysiol       Date:  2008-04-09       Impact factor: 2.714

6.  Informational basis of sensory adaptation: entropy and single-spike efficiency in rat barrel cortex.

Authors:  Mehdi Adibi; Colin W G Clifford; Ehsan Arabzadeh
Journal:  J Neurosci       Date:  2013-09-11       Impact factor: 6.167

7.  Coding of digit displacement by cell spiking and network oscillations in the monkey sensorimotor cortex.

Authors:  Claire L Witham; Stuart N Baker
Journal:  J Neurophysiol       Date:  2012-09-26       Impact factor: 2.714

Review 8.  Whisking mechanics and active sensing.

Authors:  Nicholas E Bush; Sara A Solla; Mitra Jz Hartmann
Journal:  Curr Opin Neurobiol       Date:  2016-09-13       Impact factor: 6.627

9.  Feedforward inhibition determines the angular tuning of vibrissal responses in the principal trigeminal nucleus.

Authors:  Marie-Andrée Bellavance; Maxime Demers; Martin Deschênes
Journal:  J Neurosci       Date:  2010-01-20       Impact factor: 6.167

10.  Transformation in the neural code for whisker deflection direction along the lemniscal pathway.

Authors:  Michael R Bale; Rasmus S Petersen
Journal:  J Neurophysiol       Date:  2009-09-09       Impact factor: 2.714

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