Literature DB >> 16954306

16S rRNA gene sequencing and the routine clinical microbiology laboratory: a perfect marriage?

Michael Boudewijns, Judith M Bakkers, Patrick D J Sturm, Willem J G Melchers.   

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Year:  2006        PMID： 16954306      PMCID： PMC1594676          DOI： 10.1128/JCM.01017-06

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


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  12 in total

Review 1.  16S rRNA gene sequencing for bacterial pathogen identification in the clinical laboratory.

Authors:  J B Patel
Journal:  Mol Diagn       Date:  2001-12

2.  16S ribosomal DNA sequence analysis of a large collection of environmental and clinical unidentifiable bacterial isolates.

Authors:  M Drancourt; C Bollet; A Carlioz; R Martelin; J P Gayral; D Raoult
Journal:  J Clin Microbiol       Date:  2000-10       Impact factor: 5.948

3.  Identification of clinically relevant viridans group streptococci by sequence analysis of the 16S-23S ribosomal DNA spacer region.

Authors:  Chao Chien Chen; Lee Jene Teng; Tsung Chain Chang
Journal:  J Clin Microbiol       Date:  2004-06       Impact factor: 5.948

4.  Ribosomal DNA sequencing: experiences from use in the Danish National Reference Laboratory for Identification of Bacteria.

Authors:  Jens Jørgen Christensen; Keld Andresen; Tage Justesen; Michael Kemp
Journal:  APMIS       Date:  2005-09       Impact factor: 3.205

Review 5.  Impact of 16S rRNA gene sequence analysis for identification of bacteria on clinical microbiology and infectious diseases.

Authors:  Jill E Clarridge
Journal:  Clin Microbiol Rev       Date:  2004-10       Impact factor: 26.132

6.  16S ribosomal DNA amplification for phylogenetic study.

Authors:  W G Weisburg; S M Barns; D A Pelletier; D J Lane
Journal:  J Bacteriol       Date:  1991-01       Impact factor: 3.490

7.  Evaluation of a modified gen-probe amplified direct test for detection of Mycobacterium tuberculosis complex organisms in cerebrospinal fluid.

Authors:  Joann L Cloud; Cheryl Shutt; Wade Aldous; Gail Woods
Journal:  J Clin Microbiol       Date:  2004-11       Impact factor: 5.948

8.  Anaerobic, non-sporulating, Gram-positive bacilli bacteraemia characterized by 16S rRNA gene sequencing.

Authors:  Susanna Kp Lau; Patrick Cy Woo; Ami My Fung; King-Man Chan; Gibson Ks Woo; Kwok-Yung Yuen
Journal:  J Med Microbiol       Date:  2004-12       Impact factor: 2.472

9.  Evaluation of partial 16S ribosomal DNA sequencing for identification of nocardia species by using the MicroSeq 500 system with an expanded database.

Authors:  Joann L Cloud; Patricia S Conville; Ann Croft; Dag Harmsen; Frank G Witebsky; Karen C Carroll
Journal:  J Clin Microbiol       Date:  2004-02       Impact factor: 5.948

10.  Analysis of 525 samples to determine the usefulness of PCR amplification and sequencing of the 16S rRNA gene for diagnosis of bone and joint infections.

Authors:  Florence Fenollar; Véronique Roux; Andréas Stein; Michel Drancourt; Didier Raoult
Journal:  J Clin Microbiol       Date:  2006-03       Impact factor: 5.948
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  11 in total

1.  Identification of clinically relevant viridans group streptococci by phenotypic and genotypic analysis.

Authors:  C Teles; A Smith; G Ramage; S Lang
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2010-10-28       Impact factor: 3.267

Review 2.  16S rRNA gene sequencing for bacterial identification in the diagnostic laboratory: pluses, perils, and pitfalls.

Authors:  J Michael Janda; Sharon L Abbott
Journal:  J Clin Microbiol       Date:  2007-07-11       Impact factor: 5.948

3.  The changing culture of the microbiology laboratory.

Authors:  Kevin B Laupland; Louis Valiquette
Journal:  Can J Infect Dis Med Microbiol       Date:  2013       Impact factor: 2.471

4.  Comparison of 16S rRNA sequencing with biochemical testing for species-level identification of clinical isolates of Neisseria spp.

Authors:  Arij Mechergui; Wafa Achour; Assia Ben Hassen
Journal:  World J Microbiol Biotechnol       Date:  2014-03-18       Impact factor: 3.312

Review 5.  Clinical microbiology informatics.

Authors:  Daniel D Rhoads; Vitali Sintchenko; Carol A Rauch; Liron Pantanowitz
Journal:  Clin Microbiol Rev       Date:  2014-10       Impact factor: 26.132

6.  Variation in animal performance explained by the rumen microbiome or by diet composition.

Authors:  Claire B Gleason; Robin R White
Journal:  J Anim Sci       Date:  2018-11-21       Impact factor: 3.159

7.  Analysis of Nucleotide Sequences of the 16S rRNA Gene of Novel Escherichia coli Strains Isolated from Feces of Human and Bali Cattle.

Authors:  I Wayan Suardana
Journal:  J Nucleic Acids       Date:  2014-09-09

8.  A metagenomic approach to characterize temperate bacteriophage populations from Cystic Fibrosis and non-Cystic Fibrosis bronchiectasis patients.

Authors:  Mohammad A Tariq; Francesca L C Everest; Lauren A Cowley; Anthony De Soyza; Giles S Holt; Simon H Bridge; Audrey Perry; John D Perry; Stephen J Bourke; Stephen P Cummings; Clare V Lanyon; Jeremy J Barr; Darren L Smith
Journal:  Front Microbiol       Date:  2015-02-18       Impact factor: 5.640

9.  Functional Genome Screening to Elucidate the Colistin Resistance Mechanism.

Authors:  Mohit Kumar; Ashutosh Gupta; Rajesh Kumar Sahoo; Jayanti Jena; Nagen Kumar Debata; Enketeswara Subudhi
Journal:  Sci Rep       Date:  2016-03-18       Impact factor: 4.379

10.  16S rRNA gene sequencing on a benchtop sequencer: accuracy for identification of clinically important bacteria.

Authors:  G S Watts; K Youens-Clark; M J Slepian; D M Wolk; M M Oshiro; G S Metzger; D Dhingra; L D Cranmer; B L Hurwitz
Journal:  J Appl Microbiol       Date:  2017-11-07       Impact factor: 3.772
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