Literature DB >> 16946470

Crystallization and preliminary X-ray diffraction analysis of protein 14 from Sulfolobus islandicus filamentous virus (SIFV).

Adeline Goulet1, Silvia Spinelli, Valérie Campanacci, Sophie Porciero, Stéphanie Blangy, Roger A Garrett, Herman van Tilbeurgh, Nicolas Leulliot, Tamara Basta, David Prangishvili, Christian Cambillau.   

Abstract

A large-scale programme has been embarked upon aiming towards the structural determination of conserved proteins from viruses infecting hyperthermophilic archaea. Here, the crystallization of protein 14 from the archaeal virus SIFV is reported. This protein, which contains 111 residues (MW 13 465 Da), was cloned and expressed in Escherichia coli with an N-terminal His(6) tag and purified to homogeneity. The tag was subsequently cleaved and the protein was crystallized using PEG 1000 or PEG 4000 as a precipitant. Large crystals were obtained of the native and the selenomethionine-labelled protein using sitting drops of 100-300 nl. Crystals belong to space group P6(2)22 or P6(4)22, with unit-cell parameters a = b = 68.1, c = 132.4 A. Diffraction data were collected to a maximum acceptable resolution of 2.95 and 3.20 A for the SeMet-labelled and native protein, respectively.

Entities:  

Mesh:

Substances:

Year:  2006        PMID: 16946470      PMCID: PMC2242861          DOI: 10.1107/S1744309106029150

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  12 in total

1.  Protein secondary structure prediction based on position-specific scoring matrices.

Authors:  D T Jones
Journal:  J Mol Biol       Date:  1999-09-17       Impact factor: 5.469

2.  GATEWAY recombinational cloning: application to the cloning of large numbers of open reading frames or ORFeomes.

Authors:  A J Walhout; G F Temple; M A Brasch; J L Hartley; M A Lorson; S van den Heuvel; M Vidal
Journal:  Methods Enzymol       Date:  2000       Impact factor: 1.600

3.  A medium-throughput crystallization approach.

Authors:  Gerlind Sulzenbacher; Arnaud Gruez; Véronique Roig-Zamboni; Silvia Spinelli; Christel Valencia; Fabienne Pagot; Renaud Vincentelli; Christophe Bignon; Aurelia Salomoni; Sacha Grisel; Damien Maurin; Céline Huyghe; Kent Johansson; Alice Grassick; Alain Roussel; Yves Bourne; Sophie Perrier; Linda Miallau; Phillippe Cantau; Eric Blanc; Michel Genevois; Alain Grossi; André Zenatti; Valérie Campanacci; Christian Cambillau
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2002-11-23

4.  Automated expression and solubility screening of His-tagged proteins in 96-well format.

Authors:  Renaud Vincentelli; Stéphane Canaan; Julien Offant; Christian Cambillau; Christophe Bignon
Journal:  Anal Biochem       Date:  2005-08-15       Impact factor: 3.365

5.  Structure of an archaeal virus capsid protein reveals a common ancestry to eukaryotic and bacterial viruses.

Authors:  Reza Khayat; Liang Tang; Eric T Larson; C Martin Lawrence; Mark Young; John E Johnson
Journal:  Proc Natl Acad Sci U S A       Date:  2005-12-15       Impact factor: 11.205

Review 6.  Evolutionary genomics of archaeal viruses: unique viral genomes in the third domain of life.

Authors:  David Prangishvili; Roger A Garrett; Eugene V Koonin
Journal:  Virus Res       Date:  2006-02-28       Impact factor: 3.303

7.  Preparation of selenomethionyl proteins for phase determination.

Authors:  S Doublié
Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

8.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

9.  A novel lipothrixvirus, SIFV, of the extremely thermophilic crenarchaeon Sulfolobus.

Authors:  H P Arnold; W Zillig; U Ziese; I Holz; M Crosby; T Utterback; J F Weidmann; J K Kristjanson; H P Klenk; K E Nelson; C M Fraser
Journal:  Virology       Date:  2000-02-15       Impact factor: 3.616

10.  Quantitative analysis of protein far UV circular dichroism spectra by neural networks.

Authors:  G Böhm; R Muhr; R Jaenicke
Journal:  Protein Eng       Date:  1992-04
View more
  2 in total

1.  The thermo- and acido-stable ORF-99 from the archaeal virus AFV1.

Authors:  Adeline Goulet; Silvia Spinelli; Stéphanie Blangy; Herman van Tilbeurgh; Nicolas Leulliot; Tamara Basta; David Prangishvili; Christian Cambillau; Valérie Campanacci
Journal:  Protein Sci       Date:  2009-06       Impact factor: 6.725

2.  Crystal structure of AFV3-109, a highly conserved protein from crenarchaeal viruses.

Authors:  Jenny Keller; Nicolas Leulliot; Christian Cambillau; Valérie Campanacci; Stéphanie Porciero; David Prangishvili; Patrick Forterre; Diego Cortez; Sophie Quevillon-Cheruel; Herman van Tilbeurgh
Journal:  Virol J       Date:  2007-01-22       Impact factor: 4.099

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.