Literature DB >> 12454472

A medium-throughput crystallization approach.

Gerlind Sulzenbacher1, Arnaud Gruez, Véronique Roig-Zamboni, Silvia Spinelli, Christel Valencia, Fabienne Pagot, Renaud Vincentelli, Christophe Bignon, Aurelia Salomoni, Sacha Grisel, Damien Maurin, Céline Huyghe, Kent Johansson, Alice Grassick, Alain Roussel, Yves Bourne, Sophie Perrier, Linda Miallau, Phillippe Cantau, Eric Blanc, Michel Genevois, Alain Grossi, André Zenatti, Valérie Campanacci, Christian Cambillau.   

Abstract

The first results of a medium-scale structural genomics program clearly demonstrate the value of using a medium-throughput crystallization approach based on a two-step procedure: a large screening step employing robotics, followed by manual or automated optimization of the crystallization conditions. The structural genomics program was based on cloning in the Gateway vectors pDEST17, introducing a long 21-residue tail at the N-terminus. So far, this tail has not appeared to hamper crystallization. In ten months, 25 proteins were subjected to crystallization; 13 yielded crystals, of which ten led to usable data sets and five to structures. Furthermore, the results using a robot dispensing 50-200 nl drops indicate that smaller protein samples can be used for crystallization. These still partial results might indicate present and future directions for those who have to make crucial choices concerning their crystallization platform in structural genomics programs.

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Year:  2002        PMID: 12454472     DOI: 10.1107/s0907444902013938

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  33 in total

1.  Harvesting the high-hanging fruit: the structure of the YdeN gene product from Bacillus subtilis at 1.8 angstroms resolution.

Authors:  Izabela Janda; Yancho Devedjiev; David Cooper; Maksymilian Chruszcz; Urszula Derewenda; Aleksandra Gabrys; Wladek Minor; Andrzej Joachimiak; Zygmunt S Derewenda
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2004-05-21

2.  High-throughput automated refolding screening of inclusion bodies.

Authors:  Renaud Vincentelli; Stéphane Canaan; Valérie Campanacci; Christel Valencia; Damien Maurin; Frédéric Frassinetti; Loréna Scappucini-Calvo; Yves Bourne; Christian Cambillau; Christophe Bignon
Journal:  Protein Sci       Date:  2004-10       Impact factor: 6.725

3.  Circular permutation as a tool to reduce surface entropy triggers crystallization of the signal recognition particle receptor beta subunit.

Authors:  Thomas U Schwartz; Rudolf Walczak; Günter Blobel
Journal:  Protein Sci       Date:  2004-08-31       Impact factor: 6.725

4.  Structural characterization and oligomerization of the TssL protein, a component shared by bacterial type VI and type IVb secretion systems.

Authors:  Eric Durand; Abdelrahim Zoued; Silvia Spinelli; Paul J H Watson; Marie-Stéphanie Aschtgen; Laure Journet; Christian Cambillau; Eric Cascales
Journal:  J Biol Chem       Date:  2012-02-27       Impact factor: 5.157

5.  Crystal structure of Bacillus subtilis SPP1 phage gp23.1, a putative chaperone.

Authors:  David Veesler; Stéphanie Blangy; Julie Lichière; Miguel Ortiz-Lombardía; Paulo Tavares; Valérie Campanacci; Christian Cambillau
Journal:  Protein Sci       Date:  2010-09       Impact factor: 6.725

6.  Crystal structure of Bacillus subtilis SPP1 phage gp22 shares fold similarity with a domain of lactococcal phage p2 RBP.

Authors:  David Veesler; Stéphanie Blangy; Silvia Spinelli; Paulo Tavares; Valérie Campanacci; Christian Cambillau
Journal:  Protein Sci       Date:  2010-07       Impact factor: 6.725

7.  Crystal structure of the receptor-binding protein head domain from Lactococcus lactis phage bIL170.

Authors:  Stefano Ricagno; Valérie Campanacci; Stéphanie Blangy; Silvia Spinelli; Denise Tremblay; Sylvain Moineau; Mariella Tegoni; Christian Cambillau
Journal:  J Virol       Date:  2006-09       Impact factor: 5.103

8.  Structural genomics of eukaryotic targets at a laboratory scale.

Authors:  Didier Busso; Pierre Poussin-Courmontagne; David Rosé; Raymond Ripp; Alain Litt; Jean-Claude Thierry; Dino Moras
Journal:  J Struct Funct Genomics       Date:  2005

9.  DNA shuffling as a tool for protein crystallization.

Authors:  Robert J Keenan; Daniel L Siehl; Rebecca Gorton; Linda A Castle
Journal:  Proc Natl Acad Sci U S A       Date:  2005-06-10       Impact factor: 11.205

10.  Combining site-specific mutagenesis and seeding as a strategy to crystallize 'difficult' proteins: the case of Staphylococcus aureus thioredoxin.

Authors:  Goedele Roos; Elke Brosens; Khadija Wahni; Aline Desmyter; Silvia Spinelli; Lode Wyns; Joris Messens; Remy Loris
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2006-11-30
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