Literature DB >> 16939201

Role of the PEWY glutamate in hydroquinone-quinone oxidation-reduction catalysis in the Qo Site of cytochrome bc1.

Artur Osyczka1, Haibo Zhang, Christelle Mathé, Peter R Rich, Christopher C Moser, P Leslie Dutton.   

Abstract

The glutamic acid residue of the conserved PEWY motif of the Q(o) site of cytochrome bc(1) is widely discussed as central to reversible Q(o) site catalysis of two-electron, two-proton hydroquinone-quinone oxidation-reduction. Extensive mutation of this glutamate (E295) to A, V, F, H, K, and Q in purple photosynthetic Rhodobacter capsulatus results in hydroquinone oxidation rates that are between 5 and 50-fold slower than that in the wild type. However, the mutants show little or no detectable effects on hydroquinone or quinone exchange and binding at the Q(o) site nor on subsequent Q(o) site-mediated redox equilibria in the c-chain and b-chain from pH 5-10. Lack of effects of mutations on the E(m)/pH plots rules out involvement of E295 in the strong electron-proton coupling evident in either the FeS center or heme b(L). These detailed equilibrium and kinetic analyses demonstrate that E295 is not irreplaceable in the Q(o) site catalytic mechanism. Rather, E295 and several other Q(o) site residues that can also be widely varied and still support hydroquinone oxidation illustrate the considerable resilience of Q(o) site activity to mutational change in Q(o) site environs. Residues and water molecules appear to cooperate in providing a physical and chemical environment supporting hydroquinone oxidation rates comparable to those seen in nonprotein aqueous environments at electrodes. We suggest that residues at the Q(o) site (and, possibly, other respiratory and photosynthetic quinone and oxygen binding sites) are a product of natural selection primarily acting not to lower catalytic barriers according to the traditional view of enzymatic catalysis but rather to develop specificity by raising barriers in defense of semiquinone loss or energy wasting short-circuit reactions.

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Year:  2006        PMID: 16939201     DOI: 10.1021/bi060013a

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  20 in total

1.  Effect of mutations in the cytochrome b ef loop on the electron-transfer reactions of the Rieske iron-sulfur protein in the cytochrome bc1 complex.

Authors:  Sany Rajagukguk; Shaoqing Yang; Chang-An Yu; Linda Yu; Bill Durham; Francis Millett
Journal:  Biochemistry       Date:  2007-01-25       Impact factor: 3.162

2.  Simultaneous reduction of iron-sulfur protein and cytochrome b(L) during ubiquinol oxidation in cytochrome bc(1) complex.

Authors:  Jian Zhu; Tsuyoshi Egawa; Syun-Ru Yeh; Linda Yu; Chang-An Yu
Journal:  Proc Natl Acad Sci U S A       Date:  2007-03-13       Impact factor: 11.205

3.  Exposing the complex III Qo semiquinone radical.

Authors:  Haibo Zhang; Artur Osyczka; P Leslie Dutton; Christopher C Moser
Journal:  Biochim Biophys Acta       Date:  2007-05-01

4.  The cytochrome b Zn binding amino acid residue histidine 291 is essential for ubihydroquinone oxidation at the Qo site of bacterial cytochrome bc1.

Authors:  Francesco Francia; Marco Malferrari; Pascal Lanciano; Stefan Steimle; Fevzi Daldal; Giovanni Venturoli
Journal:  Biochim Biophys Acta       Date:  2016-09-05

5.  X-Ray absorption studies of Zn2+ binding sites in bacterial, avian, and bovine cytochrome bc1 complexes.

Authors:  Lisa Giachini; Francesco Francia; Giulia Veronesi; Dong-Woo Lee; Fevzi Daldal; Li-Shar Huang; Edward A Berry; Tiziana Cocco; Sergio Papa; Federico Boscherini; Giovanni Venturoli
Journal:  Biophys J       Date:  2007-06-15       Impact factor: 4.033

6.  Breaking the Q-cycle: finding new ways to study Qo through thermodynamic manipulations.

Authors:  Sarah E Chobot; Haibo Zhang; Christopher C Moser; P Leslie Dutton
Journal:  J Bioenerg Biomembr       Date:  2008-10-28       Impact factor: 2.945

Review 7.  Design and use of photoactive ruthenium complexes to study electron transfer within cytochrome bc1 and from cytochrome bc1 to cytochrome c.

Authors:  Francis Millett; Jeffrey Havens; Sany Rajagukguk; Bill Durham
Journal:  Biochim Biophys Acta       Date:  2012-09-15

Review 8.  The mechanism of ubihydroquinone oxidation at the Qo-site of the cytochrome bc1 complex.

Authors:  Antony R Crofts; Sangjin Hong; Charles Wilson; Rodney Burton; Doreen Victoria; Chris Harrison; Klaus Schulten
Journal:  Biochim Biophys Acta       Date:  2013-02-08

Review 9.  The Q-cycle reviewed: How well does a monomeric mechanism of the bc(1) complex account for the function of a dimeric complex?

Authors:  Antony R Crofts; J Todd Holland; Doreen Victoria; Derrick R J Kolling; Sergei A Dikanov; Ryan Gilbreth; Sangmoon Lhee; Richard Kuras; Mariana Guergova Kuras
Journal:  Biochim Biophys Acta       Date:  2008-05-01

10.  Visualizing changes in electron distribution in coupled chains of cytochrome bc(1) by modifying barrier for electron transfer between the FeS cluster and heme c(1).

Authors:  Ewelina Cieluch; Krzysztof Pietryga; Marcin Sarewicz; Artur Osyczka
Journal:  Biochim Biophys Acta       Date:  2009-11-14
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