Literature DB >> 16935950

Measurement of monomer-oligomer distributions via fluorescence moment image analysis.

Mikhail Sergeev1, Santiago Costantino, Paul W Wiseman.   

Abstract

We present higher-order moment analysis of fluorescence intensity fluctuations from individual laser scanning microscopy images applied to study monomer-oligomer distributions. We demonstrate that the number densities and brightness ratios of a mixed population of monomers and oligomers can be determined by analyzing higher-order moments of the fluorescence intensity fluctuations from individual images for specific ranges of densities and particle brightness ratios. Computer simulations and experiments with fluorescent microspheres and cells were performed to illustrate the detection limits and accuracy of this statistical approach. The simulation results show that the concentration of the dimer or oligomer population should be less than or equal to the monomeric concentration for the method to provide accurate results, and that the upper density detection limit of the population of monomers is one order-of-magnitude higher than the concentration of the oligomers. We implemented this technique to resolve two populations of fluorescent microspheres with different brightness ratios and we also applied the moment-analysis method to examine the distribution of aggregation states of PDGF-beta receptors in human fibroblast cells. The method was able to resolve a tetrameric population of the PDGF-beta receptors relative to the background distribution of nonspecifically bound fluorophore.

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Year:  2006        PMID: 16935950      PMCID: PMC1630488          DOI: 10.1529/biophysj.106.091181

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  33 in total

1.  Fluorescence-intensity distribution analysis and its application in biomolecular detection technology.

Authors:  P Kask; K Palo; D Ullmann; K Gall
Journal:  Proc Natl Acad Sci U S A       Date:  1999-11-23       Impact factor: 11.205

2.  Fluorescence correlation spectroscopy with high-order and dual-color correlation to probe nonequilibrium steady states.

Authors:  Hong Qian; Elliot L Elson
Journal:  Proc Natl Acad Sci U S A       Date:  2004-02-17       Impact factor: 11.205

3.  Image correlation spectroscopy. II. Optimization for ultrasensitive detection of preexisting platelet-derived growth factor-beta receptor oligomers on intact cells.

Authors:  P W Wiseman; N O Petersen
Journal:  Biophys J       Date:  1999-02       Impact factor: 4.033

4.  Aggregation of PDGF-beta receptors in human skin fibroblasts: characterization by image correlation spectroscopy (ICS).

Authors:  P W Wiseman; P Höddelius; N O Petersen; K E Magnusson
Journal:  FEBS Lett       Date:  1997-01-13       Impact factor: 4.124

5.  High-order fluorescence fluctuation analysis of model protein clusters.

Authors:  A G Palmer; N L Thompson
Journal:  Proc Natl Acad Sci U S A       Date:  1989-08       Impact factor: 11.205

6.  On the analysis of high order moments of fluorescence fluctuations.

Authors:  H Qian; E L Elson
Journal:  Biophys J       Date:  1990-02       Impact factor: 4.033

7.  On the time reversal of noise signals.

Authors:  I Z Steinberg
Journal:  Biophys J       Date:  1986-07       Impact factor: 4.033

8.  Quantitation of membrane receptor distributions by image correlation spectroscopy: concept and application.

Authors:  N O Petersen; P L Höddelius; P W Wiseman; O Seger; K E Magnusson
Journal:  Biophys J       Date:  1993-09       Impact factor: 4.033

Review 9.  Regulation of signal transduction and signal diversity by receptor oligomerization.

Authors:  M A Lemmon; J Schlessinger
Journal:  Trends Biochem Sci       Date:  1994-11       Impact factor: 13.807

Review 10.  A role for lipid shells in targeting proteins to caveolae, rafts, and other lipid domains.

Authors:  Richard G W Anderson; Ken Jacobson
Journal:  Science       Date:  2002-06-07       Impact factor: 47.728

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  12 in total

1.  Heterospecies partition analysis reveals binding curve and stoichiometry of protein interactions in living cells.

Authors:  Bin Wu; Yan Chen; Joachim D Müller
Journal:  Proc Natl Acad Sci U S A       Date:  2010-02-08       Impact factor: 11.205

2.  An elegant way to quantitatively analyze oligomer formation in solution.

Authors:  Yves Engelborghs
Journal:  Biophys J       Date:  2012-11-07       Impact factor: 4.033

3.  Aggregation distributions on cells determined by photobleaching image correlation spectroscopy.

Authors:  Giuseppe D Ciccotosto; Noga Kozer; Timothy T Y Chow; James W M Chon; Andrew H A Clayton
Journal:  Biophys J       Date:  2013-03-05       Impact factor: 4.033

4.  Two-Color Spatial Cumulant Analysis Detects Heteromeric Interactions between Membrane Proteins.

Authors:  Daniel J Foust; Antoine G Godin; Alessandro Ustione; Paul W Wiseman; David W Piston
Journal:  Biophys J       Date:  2019-09-28       Impact factor: 4.033

5.  Live-cell visualization of dynamics of HIV budding site interactions with an ESCRT component.

Authors:  Viola Baumgärtel; Sergey Ivanchenko; Aurélie Dupont; Mikhail Sergeev; Paul W Wiseman; Hans-Georg Kräusslich; Christoph Bräuchle; Barbara Müller; Don C Lamb
Journal:  Nat Cell Biol       Date:  2011-03-10       Impact factor: 28.824

6.  Total internal reflection with fluorescence correlation spectroscopy: Applications to substrate-supported planar membranes.

Authors:  Nancy L Thompson; Xiang Wang; Punya Navaratnarajah
Journal:  J Struct Biol       Date:  2009-03-06       Impact factor: 2.867

Review 7.  Quantitative live-cell imaging of human immunodeficiency virus (HIV-1) assembly.

Authors:  Viola Baumgärtel; Barbara Müller; Don C Lamb
Journal:  Viruses       Date:  2012-05-04       Impact factor: 5.048

8.  Determination of membrane protein transporter oligomerization in native tissue using spatial fluorescence intensity fluctuation analysis.

Authors:  Mikhail Sergeev; Antoine G Godin; Liyo Kao; Natalia Abuladze; Paul W Wiseman; Ira Kurtz
Journal:  PLoS One       Date:  2012-04-27       Impact factor: 3.240

Review 9.  Confocal Spectroscopy to Study Dimerization, Oligomerization and Aggregation of Proteins: A Practical Guide.

Authors:  Yann Gambin; Mark Polinkovsky; Bill Francois; Nichole Giles; Akshay Bhumkar; Emma Sierecki
Journal:  Int J Mol Sci       Date:  2016-04-30       Impact factor: 5.923

10.  Quantifying the dynamics of the oligomeric transcription factor STAT3 by pair correlation of molecular brightness.

Authors:  Elizabeth Hinde; Elvis Pandžić; Zhengmin Yang; Ivan H W Ng; David A Jans; Marie A Bogoyevitch; Enrico Gratton; Katharina Gaus
Journal:  Nat Commun       Date:  2016-03-24       Impact factor: 14.919

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