Literature DB >> 16931336

Interdomain communication between the thiolation and thioesterase domains of EntF explored by combinatorial mutagenesis and selection.

Zhe Zhou1, Jonathan R Lai, Christopher T Walsh.   

Abstract

Thiolation (T) domains are protein way stations in natural product assembly lines. In the enterobactin synthetase, the T domain on EntF is recognized in cis by its catalytic partners: the EntF condensation (C), adenylation (A), and thioesterase (TE) domains. To assess surface features of the EntF T domain recognized by C, A, and TE, regions of the EntF T domain were submitted to shotgun alanine scanning and Ent production selection, which revealed residues that could not be substituted by Ala. EntF mutants bearing Ala in such positions were assayed in vitro for Ent production with EntEB, and for A-T, C-T, and T-TE communications. We concluded that G1027A and M1030A are specifically defective in acyl transfer from T to TE. These residues define an interaction surface between these two in cis domains in an NRPS module.

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Year:  2006        PMID: 16931336     DOI: 10.1016/j.chembiol.2006.06.011

Source DB:  PubMed          Journal:  Chem Biol        ISSN: 1074-5521


  15 in total

1.  Directed evolution can rapidly improve the activity of chimeric assembly-line enzymes.

Authors:  Michael A Fischbach; Jonathan R Lai; Eric D Roche; Christopher T Walsh; David R Liu
Journal:  Proc Natl Acad Sci U S A       Date:  2007-07-09       Impact factor: 11.205

2.  Directed evolution of aryl carrier proteins in the enterobactin synthetase.

Authors:  Zhe Zhou; Jonathan R Lai; Christopher T Walsh
Journal:  Proc Natl Acad Sci U S A       Date:  2007-07-02       Impact factor: 11.205

3.  Structural and mechanistic analysis of protein interactions in module 3 of the 6-deoxyerythronolide B synthase.

Authors:  Yinyan Tang; Alice Y Chen; Chu-Young Kim; David E Cane; Chaitan Khosla
Journal:  Chem Biol       Date:  2007-08

Review 4.  Structural insights into nonribosomal peptide enzymatic assembly lines.

Authors:  Alexander Koglin; Christopher T Walsh
Journal:  Nat Prod Rep       Date:  2009-05-22       Impact factor: 13.423

Review 5.  Explorations of catalytic domains in non-ribosomal peptide synthetase enzymology.

Authors:  Gene H Hur; Christopher R Vickery; Michael D Burkart
Journal:  Nat Prod Rep       Date:  2012-07-17       Impact factor: 13.423

Review 6.  Biosynthesis of depsipeptides, or Depsi: The peptides with varied generations.

Authors:  Diego A Alonzo; T Martin Schmeing
Journal:  Protein Sci       Date:  2020-11-02       Impact factor: 6.725

7.  Structural basis for phosphopantetheinyl carrier domain interactions in the terminal module of nonribosomal peptide synthetases.

Authors:  Ye Liu; Tengfei Zheng; Steven D Bruner
Journal:  Chem Biol       Date:  2011-11-23

Review 8.  Engineering polyketide synthases and nonribosomal peptide synthetases.

Authors:  Gavin J Williams
Journal:  Curr Opin Struct Biol       Date:  2013-07-06       Impact factor: 6.809

9.  The crystal structure of BlmI as a model for nonribosomal peptide synthetase peptidyl carrier proteins.

Authors:  Jeremy R Lohman; Ming Ma; Marianne E Cuff; Lance Bigelow; Jessica Bearden; Gyorgy Babnigg; Andrzej Joachimiak; George N Phillips; Ben Shen
Journal:  Proteins       Date:  2014-07

Review 10.  Opportunities for enzyme engineering in natural product biosynthesis.

Authors:  Peter Bernhardt; Sarah E O'Connor
Journal:  Curr Opin Chem Biol       Date:  2009-02-05       Impact factor: 8.822

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