Literature DB >> 16929924

Simulating fibrin clotting time.

Gerard Marx1.   

Abstract

The clotting time (CT) of fibrinogen mixed with thrombin decreased, then increased with increasing fibrinogen levels. By contrast, log CT decreased monotonically with respect to the log level of activating enzyme (thrombin or reptilase). Here, the CT was determined over a large range of fibrinogen concentration (to 100 mg ml(-1)) at a fixed level of enzyme. A new parameter, [Fib]min, the minimal fibrinogen concentration required for thrombin or reptilase-instigated phase change (coagulation), was determined as [Fib]min = 0.2 +/- 0.05 microM fibrinogen. A dynamic simulation program (Stella) was employed to organize simulations based on simple and complex coagulation mechanisms, which generated CT values. The successful simulation aimed at forming [Fib]min and "recognized" the binding of unreacted fibrinogen with intermediate fibrin protofibrils. The "virtual data" mimicked the biphasic experimental CT values over a wide range of concentrations. Fibrinogen appeared to act in three modalities: as a thrombin substrate; as a precursor of fibrin; and as a competitor for fibrin protofibrils. The optimized simulation may provide a basis for predicting CT in more complex systems, such as pathological plasmas or whole blood or at high concentrations encountered with fibrin sealant.

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Year:  2006        PMID: 16929924     DOI: 10.1007/s11517-005-0007-z

Source DB:  PubMed          Journal:  Med Biol Eng Comput        ISSN: 0140-0118            Impact factor:   2.602


  27 in total

1.  Computer modeling of fibrin polymerization kinetics correlated with electron microscope and turbidity observations: clot structure and assembly are kinetically controlled.

Authors:  J W Weisel; C Nagaswami
Journal:  Biophys J       Date:  1992-07       Impact factor: 4.033

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Journal:  Biochemistry       Date:  1986-06-03       Impact factor: 3.162

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Journal:  J Biol Chem       Date:  1980-07-10       Impact factor: 5.157

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Journal:  Biochemistry       Date:  1980-05-27       Impact factor: 3.162

Review 9.  Elevated clotting factor levels and venous thrombosis.

Authors:  Rogier M Bertina
Journal:  Pathophysiol Haemost Thromb       Date:  2003 Sep-2004 Dec

Review 10.  Fibrinogen--marker or mediator of vascular disease?

Authors:  Walter H Reinhart
Journal:  Vasc Med       Date:  2003       Impact factor: 3.239

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  1 in total

Review 1.  Recent advances in computational modeling of fibrin clot formation: A review.

Authors:  Sumith Yesudasan; Rodney D Averett
Journal:  Comput Biol Chem       Date:  2019-11-10       Impact factor: 2.877

  1 in total

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