Literature DB >> 16920409

Complete nucleotide sequences and gene organization of mitochondrial genome of Bufo gargarizans.

Sen-Yang Cao1, Xiao-Bing Wu, Peng Yan, Yu-Ling Hu, Xia Su, Zhi-Gang Jiang.   

Abstract

The complete mitochondrial genome of Bufo gargarizans was sequenced using overlapping polymerase chain reaction (PCR) amplicons (GenBank Accession No. DQ275350). The genome is 17,277 base pairs in length, containing 13 protein-coding genes (ATP6, ATP8, COI-III, ND1-6, ND4L, Cyt b), 2 ribosomal RNAs (12S rRNA and 16S rRNA), 22 transfer RNAs and a putative control region. We analyzed the sequence using bioinformatics methods comparing the obtained mtDNA sequence with other toads and frogs. Based on the concatenated nucleotide sequences of protein-coding genes, we constructed a phylogenetic tree with maximum likelihood (ML) and maximum parsimony (MP) methods and discussed the phylogenetic relationships among 11 species of Anura.

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Year:  2006        PMID: 16920409     DOI: 10.1016/j.mito.2006.07.003

Source DB:  PubMed          Journal:  Mitochondrion        ISSN: 1567-7249            Impact factor:   4.160


  7 in total

1.  Genetic diversity and demography of Bufo japonicus and B. torrenticola (Amphibia: Anura: Bufonidae) influenced by the Quaternary climate.

Authors:  Kazumi Fukutani; Masafumi Matsui; Dung Van Tran; Kanto Nishikawa
Journal:  PeerJ       Date:  2022-06-08       Impact factor: 3.061

2.  Bibliometric Analyses of Web of Science Illuminate Research Advances of Neuropterida.

Authors:  Shuo Tian; Yuxin An; Ruyue Zhang; Liming Wang; Yuyu Wang
Journal:  Insects       Date:  2022-05-16       Impact factor: 3.139

3.  The evolution of mitochondrial genomes in modern frogs (Neobatrachia): nonadaptive evolution of mitochondrial genome reorganization.

Authors:  Yun Xia; Yuchi Zheng; Ikuo Miura; Pamela B Y Wong; Robert W Murphy; Xiaomao Zeng
Journal:  BMC Genomics       Date:  2014-08-20       Impact factor: 3.969

4.  Characterization of the mitochondrial genomes of two toads, Anaxyrus americanus (Anura: Bufonidae) and Bufotes pewzowi (Anura: Bufonidae), with phylogenetic and selection pressure analyses.

Authors:  Yu-Ting Cai; Qin Li; Jia-Yong Zhang; Kenneth B Storey; Dan-Na Yu
Journal:  PeerJ       Date:  2020-04-14       Impact factor: 2.984

5.  Structural Features and Phylogenetic Implications of Four New Mitogenomes of Caliscelidae (Hemiptera: Fulgoromorpha).

Authors:  Nian Gong; Lin Yang; Xiang-Sheng Chen
Journal:  Int J Mol Sci       Date:  2021-01-29       Impact factor: 5.923

6.  The complete mitochondrial genome of bean goose (Anser fabalis) and implications for anseriformes taxonomy.

Authors:  Gang Liu; Lizhi Zhou; Lili Zhang; Zijun Luo; Wenbin Xu
Journal:  PLoS One       Date:  2013-05-23       Impact factor: 3.240

7.  Complete mitogenome of Asiatic lion resolves phylogenetic status within Panthera.

Authors:  Snehal B Bagatharia; Madhvi N Joshi; Rohan V Pandya; Aanal S Pandit; Riddhi P Patel; Shivangi M Desai; Anu Sharma; Omkar Panchal; Falguni P Jasmani; Akshay K Saxena
Journal:  BMC Genomics       Date:  2013-08-23       Impact factor: 3.969

  7 in total

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