Literature DB >> 33572873

Structural Features and Phylogenetic Implications of Four New Mitogenomes of Caliscelidae (Hemiptera: Fulgoromorpha).

Nian Gong1,2,3, Lin Yang1,2,3, Xiang-Sheng Chen1,2,3.   

Abstract

To explore the differences in mitogenome variation and phylogenetics among lineages of the Hemiptera superfamily Fulgoroidea, we sequenced four new mitogenomes of Caliscelidae: two species of the genus Bambusicaliscelis (Caliscelinae: Caliscelini), namely Bambusicaliscelis flavus and B. fanjingensis, and two species of the genus Youtuus (Ommatidiotinae: Augilini), namely Youtuus strigatus and Y. erythrus. The four mitogenomes were 15,922-16,640 bp (base pair) in length, with 37 mitochondrial genes and an AT-rich region. Gene content and arrangement were similar to those of most other sequenced hexapod mitogenomes. All protein-coding genes (PCGs) started with a canonical ATN or GTG and ended with TAA or an incomplete stop codon single T. Except for two transfer RNAs (tRNAs; trnS1 and trnV) lacking a dihydrouridine arm in the four species and trnC lacking a dihydrouridine stem in the Youtuus species, the remaining tRNAs could fold into canonical cloverleaf secondary structures. Phylogenetic analyses based on sequence data of 13 PCGs in the 28 Fulgoroidea species and two outgroups revealed that Delphacidae was monophyletic with strong support. Our data suggest that Fulgoridae is more ancient than Achilidae. Furthermore, Flatidae, Issidae, and Ricaniidae always cluster to form a sister group to Caliscelidae.

Entities:  

Keywords:  Caliscelidae; genomics; mitogenome; phylogenetics; planthopper

Year:  2021        PMID: 33572873      PMCID: PMC7866285          DOI: 10.3390/ijms22031348

Source DB:  PubMed          Journal:  Int J Mol Sci        ISSN: 1422-0067            Impact factor:   5.923


  37 in total

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Journal:  Gene       Date:  1999-09-30       Impact factor: 3.688

Review 2.  Animal mitochondrial genomes.

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Journal:  Nucleic Acids Res       Date:  1999-04-15       Impact factor: 16.971

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Journal:  Nucleic Acids Res       Date:  1997-03-01       Impact factor: 16.971

4.  PartitionFinder 2: New Methods for Selecting Partitioned Models of Evolution for Molecular and Morphological Phylogenetic Analyses.

Authors:  Robert Lanfear; Paul B Frandsen; April M Wright; Tereza Senfeld; Brett Calcott
Journal:  Mol Biol Evol       Date:  2017-03-01       Impact factor: 16.240

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Authors:  N T Perna; T D Kocher
Journal:  J Mol Evol       Date:  1995-09       Impact factor: 2.395

6.  The complete mitochondrial genome of the diamondback moth, Plutella xylostella (Lepidoptera: Plutellidae).

Authors:  Li-Shang Dai; Bao-Jian Zhu; Cen Qian; Cong-Fen Zhang; Jun Li; Lei Wang; Guo-Qing Wei; Chao-Liang Liu
Journal:  Mitochondrial DNA A DNA Mapp Seq Anal       Date:  2014-09-04       Impact factor: 1.514

7.  The hemiptera (insecta) of Canada: constructing a reference library of DNA barcodes.

Authors:  Rodger A Gwiazdowski; Robert G Foottit; H Eric L Maw; Paul D N Hebert
Journal:  PLoS One       Date:  2015-04-29       Impact factor: 3.240

8.  Two new species of the bamboo-feeding genus Bambusicaliscelis Chen & Zhang, 2011 from China (Hemiptera, Fulgoromorpha, Caliscelidae).

Authors:  Nian Gong; Lin Yang; Xiang-Sheng Chen
Journal:  Zookeys       Date:  2018-07-26       Impact factor: 1.546

9.  A comparative analysis of mitochondrial genomes in Coleoptera (Arthropoda: Insecta) and genome descriptions of six new beetles.

Authors:  N C Sheffield; H Song; S L Cameron; M F Whiting
Journal:  Mol Biol Evol       Date:  2008-09-08       Impact factor: 16.240

10.  Youtuus, a new bamboo-feeding genus of the tribe Augilini with two new species from China (Hemiptera, Fulgoromorpha, Caliscelidae).

Authors:  Nian Gong; Lin Yang; Xiang-Sheng Chen
Journal:  Zookeys       Date:  2018-09-04       Impact factor: 1.546

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  1 in total

1.  Comparative Analysis of the Complete Mitochondrial Genomes of Five Species of Ricaniidae (Hemiptera: Fulgoromorpha) and Phylogenetic Implications.

Authors:  Huan Zhang; Wei Fang; Xiaoyun Zhao; Xin Jiang; Adam Stroiński; Daozheng Qin
Journal:  Biology (Basel)       Date:  2022-01-07
  1 in total

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