Literature DB >> 16919694

The evolution of genetic topologies.

Rodney J Dyer1.   

Abstract

This manuscript explores the simultaneous evolution of population genetic parameters and topological features within a population graph through a series of Monte Carlo simulations. I show that node centrality and graph breadth are significantly correlated to population genetic parameters Phi(ST) and M; (rho=-0.95;rho=-0.98, respectively), which are commonly used in quantifying among population genetic structure and isolation by distance. Next, the topological consequences of migration patterns are examined by contrasting N-island and stepping stone models of gene movement. Finally, I show how variation in migration rate influences the rate of formation of specific topological features with particular emphasis to the phase transition that occurs when populations begin to become fixed due to restricted movement of genes among populations. I close by discussing the utility of this method for the analysis of intraspecific genetic variation.

Mesh:

Year:  2006        PMID: 16919694     DOI: 10.1016/j.tpb.2006.07.001

Source DB:  PubMed          Journal:  Theor Popul Biol        ISSN: 0040-5809            Impact factor:   1.570


  12 in total

Review 1.  Inference of population history by coupling exploratory and model-driven phylogeographic analyses.

Authors:  Ryan C Garrick; Adalgisa Caccone; Paul Sunnucks
Journal:  Int J Mol Sci       Date:  2010-03-24       Impact factor: 5.923

2.  High gene flow in epiphytic ferns despite habitat loss and fragmentation.

Authors:  Manuela Winkler; Marcus Koch; Peter Hietz
Journal:  Conserv Genet       Date:  2011-07-02       Impact factor: 2.538

3.  Ascertaining gene flow patterns in livestock populations of developing countries: a case study in Burkina Faso goat.

Authors:  Amadou Traoré; Isabel Álvarez; Iván Fernández; Lucía Pérez-Pardal; Adama Kaboré; Gisèlle Ms Ouédraogo-Sanou; Yacouba Zaré; Hamidou H Tambourá; Félix Goyache
Journal:  BMC Genet       Date:  2012-05-07       Impact factor: 2.797

4.  Applications of graph theory to landscape genetics.

Authors:  Colin J Garroway; Jeff Bowman; Denis Carr; Paul J Wilson
Journal:  Evol Appl       Date:  2008-09-25       Impact factor: 5.183

5.  Disentangling genetic structure for genetic monitoring of complex populations.

Authors:  Brook G Milligan; Frederick I Archer; Anne-Laure Ferchaud; Brian K Hand; Elizabeth M Kierepka; Robin S Waples
Journal:  Evol Appl       Date:  2018-03-23       Impact factor: 5.183

6.  On-farm dynamic management of genetic diversity: the impact of seed diffusions and seed saving practices on a population-variety of bread wheat.

Authors:  Mathieu Thomas; Elise Demeulenaere; Julie C Dawson; Abdul Rehman Khan; Nathalie Galic; Sophie Jouanne-Pin; Carine Remoue; Christophe Bonneuil; Isabelle Goldringer
Journal:  Evol Appl       Date:  2012-12       Impact factor: 5.183

7.  How does the functional diversity of frugivorous birds shape the spatial pattern of seed dispersal? A case study in a relict plant species.

Authors:  Jessica E Lavabre; Luis J Gilarranz; Miguel A Fortuna; Jordi Bascompte
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2016-05-19       Impact factor: 6.237

8.  Single-Locus versus Multilocus Patterns of Local Adaptation to Climate in Eastern White Pine (Pinus strobus, Pinaceae).

Authors:  Om P Rajora; Andrew J Eckert; John W R Zinck
Journal:  PLoS One       Date:  2016-07-07       Impact factor: 3.240

9.  The genetic network of greater sage-grouse: Range-wide identification of keystone hubs of connectivity.

Authors:  Todd B Cross; Michael K Schwartz; David E Naugle; Brad C Fedy; Jeffrey R Row; Sara J Oyler-McCance
Journal:  Ecol Evol       Date:  2018-05-04       Impact factor: 2.912

10.  How much genetic variation is stored in the endangered and fragmented shrub Tetraena mongolica Maxim?

Authors:  Yingbiao Zhi; Zhonglou Sun; Ping Sun; Kai Zhao; Yangnan Guo; Dejian Zhang; Baowei Zhang
Journal:  PeerJ       Date:  2018-09-21       Impact factor: 2.984

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