Literature DB >> 16919497

IMP dehydrogenase: structural schizophrenia and an unusual base.

Lizbeth Hedstrom1, Lu Gan.   

Abstract

Textbooks describe enzymes as relatively rigid templates for the transition state of a chemical reaction, and indeed an enzyme such as chymotrypsin, which catalyzes a relatively simple hydrolysis reaction, is reasonably well described by this model. Inosine monophosphate dehydrogenase (IMPDH) undergoes a remarkable array of conformational transitions in the course of a complicated catalytic cycle, offering a dramatic counterexample to this view. IMPDH displays several other unusual mechanistic features, including an Arg residue that may act as a general base catalyst and a dynamic monovalent cation site. Further, IMPDH appears to be involved in 'moon-lighting' functions that may require additional conformational states. How the balance between conformational states is maintained and how the various conformational states interconvert is only beginning to be understood.

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Year:  2006        PMID: 16919497     DOI: 10.1016/j.cbpa.2006.08.005

Source DB:  PubMed          Journal:  Curr Opin Chem Biol        ISSN: 1367-5931            Impact factor:   8.822


  21 in total

1.  X-ray structure of Paramecium bursaria Chlorella virus arginine decarboxylase: insight into the structural basis for substrate specificity.

Authors:  Rahul Shah; Radha Akella; Elizabeth J Goldsmith; Margaret A Phillips
Journal:  Biochemistry       Date:  2007-02-17       Impact factor: 3.162

Review 2.  IMP dehydrogenase: structure, mechanism, and inhibition.

Authors:  Lizbeth Hedstrom
Journal:  Chem Rev       Date:  2009-07       Impact factor: 60.622

3.  Allosteric activation via kinetic control: potassium accelerates a conformational change in IMP dehydrogenase.

Authors:  Thomas V Riera; Lianqing Zheng; Helen R Josephine; Donghong Min; Wei Yang; Lizbeth Hedstrom
Journal:  Biochemistry       Date:  2011-09-09       Impact factor: 3.162

4.  Bacillus anthracis inosine 5'-monophosphate dehydrogenase in action: the first bacterial series of structures of phosphate ion-, substrate-, and product-bound complexes.

Authors:  Magdalena Makowska-Grzyska; Youngchang Kim; Ruiying Wu; Rosemarie Wilton; Deviprasad R Gollapalli; Ximi K Wang; Rongguang Zhang; Robert Jedrzejczak; Jamey C Mack; Natalia Maltseva; Rory Mulligan; T Andrew Binkowski; Piotr Gornicki; Misty L Kuhn; Wayne F Anderson; Lizbeth Hedstrom; Andrzej Joachimiak
Journal:  Biochemistry       Date:  2012-07-25       Impact factor: 3.162

5.  Mycophenolate mofetil decreases atherosclerotic lesion size by depression of aortic T-lymphocyte and interleukin-17-mediated macrophage accumulation.

Authors:  Sibylle von Vietinghoff; Ekaterina K Koltsova; Javier Mestas; Cody J Diehl; Joseph L Witztum; Klaus Ley
Journal:  J Am Coll Cardiol       Date:  2011-05-24       Impact factor: 24.094

6.  Structure of glycerol-3-phosphate dehydrogenase, an essential monotopic membrane enzyme involved in respiration and metabolism.

Authors:  Joanne I Yeh; Unmesh Chinte; Shoucheng Du
Journal:  Proc Natl Acad Sci U S A       Date:  2008-02-22       Impact factor: 11.205

7.  Mechanistic investigations of the dehydration reaction of lacticin 481 synthetase using site-directed mutagenesis.

Authors:  Young Ok You; Wilfred A van der Donk
Journal:  Biochemistry       Date:  2007-04-25       Impact factor: 3.162

8.  Targeting a prokaryotic protein in a eukaryotic pathogen: identification of lead compounds against cryptosporidiosis.

Authors:  Nwakaso N Umejiego; Deviprasad Gollapalli; Lisa Sharling; Anna Volftsun; Jennifer Lu; Nicole N Benjamin; Adam H Stroupe; Thomas V Riera; Boris Striepen; Lizbeth Hedstrom
Journal:  Chem Biol       Date:  2008-01

Review 9.  The dynamic determinants of reaction specificity in the IMPDH/GMPR family of (β/α)(8) barrel enzymes.

Authors:  Lizbeth Hedstrom
Journal:  Crit Rev Biochem Mol Biol       Date:  2012-02-15       Impact factor: 8.250

10.  Inosine Monophosphate Dehydrogenase Dependence in a Subset of Small Cell Lung Cancers.

Authors:  Fang Huang; Min Ni; Milind D Chalishazar; Kenneth E Huffman; Jiyeon Kim; Ling Cai; Xiaolei Shi; Feng Cai; Lauren G Zacharias; Abbie S Ireland; Kailong Li; Wen Gu; Akash K Kaushik; Xin Liu; Adi F Gazdar; Trudy G Oliver; John D Minna; Zeping Hu; Ralph J DeBerardinis
Journal:  Cell Metab       Date:  2018-06-28       Impact factor: 27.287

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