Literature DB >> 16919368

Molecular cloning, sequence characterization and tissue-specific expression of six NAC-like genes in soybean (Glycine max (L.) Merr.).

Qingchang Meng1, Chunhong Zhang, Junyi Gai, Deyue Yu.   

Abstract

NAC proteins have been considered as one of the novel classes of plant-specific transcription factors functioning in diverse and vital physiological processes during plant development. In this study, six NAC-like genes from soybean, designated as GmNAC1-GmNAC6, were cloned and characterized. They each contained two introns and three exons and shared conservative structure of genomic organization. The predicted proteins, GmNAC1-GmNAC6, were similar in sequences, especially in NAC domain regions. However, RT-PCR analysis indicated that each GmNAC gene exhibited a specific expression pattern in tissues examined. GmNAC2, 3, 4, and 6 were expressed in most tested tissues while GmNAC1 and GmNAC5 were limited to a few tissues. In addition, expression patterns of GmNAC genes were characterized during seed filling and coordinated expression was observed between GmNAC genes. Finally, based on phylogenetic analysis, six GmNAC proteins were classed into five subgroups with different putative functions. To our knowledge, this is the first report on molecular cloning and initial characterization of NAC-like genes in soybean. Our results may provide the basis for future investigations of NAC-like genes' roles in seed development and other physiological processes in this important crop.

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Year:  2006        PMID: 16919368     DOI: 10.1016/j.jplph.2006.05.019

Source DB:  PubMed          Journal:  J Plant Physiol        ISSN: 0176-1617            Impact factor:   3.549


  20 in total

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Journal:  Mol Biol Rep       Date:  2014-07-02       Impact factor: 2.316

2.  Characterization of a novel wheat NAC transcription factor gene involved in defense response against stripe rust pathogen infection and abiotic stresses.

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Journal:  Mol Biol Rep       Date:  2010-03-07       Impact factor: 2.316

3.  Mapping of QTL for agronomic traits using high-density SNPs with an RIL population in maize.

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Journal:  Genes Genomics       Date:  2021-09-30       Impact factor: 1.839

4.  Molecular characterization of stress-inducible GmNAC genes in soybean.

Authors:  Lam-Son Phan Tran; Truyen N Quach; Satish K Guttikonda; Donavan L Aldrich; Rajesh Kumar; Anjanasree Neelakandan; Babu Valliyodan; Henry T Nguyen
Journal:  Mol Genet Genomics       Date:  2009-03-11       Impact factor: 3.291

5.  Identification and characterization of class 1 DXS gene encoding 1-deoxy-D-xylulose-5-phosphate synthase, the first committed enzyme of the MEP pathway from soybean.

Authors:  Man Zhang; Kai Li; Chunhong Zhang; Junyi Gai; Deyue Yu
Journal:  Mol Biol Rep       Date:  2008-04-25       Impact factor: 2.316

6.  Cloning and functional characterization of an O-acetylserine(thiol)lyase-encoding gene in wild soybean (Glycine soja).

Authors:  Chunhong Zhang; Qingchang Meng; Junyi Gai; Deyue Yu
Journal:  Mol Biol Rep       Date:  2007-07-05       Impact factor: 2.316

7.  Gene expression changes in response to drought stress in Citrullus colocynthis.

Authors:  Ying Si; Cankui Zhang; Shasha Meng; Fenny Dane
Journal:  Plant Cell Rep       Date:  2009-05-05       Impact factor: 4.570

8.  Functional characterization of tomato membrane-bound NAC transcription factors.

Authors:  Payel Bhattacharjee; Rohit Das; Arunava Mandal; Pallob Kundu
Journal:  Plant Mol Biol       Date:  2016-12-30       Impact factor: 4.076

9.  Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response.

Authors:  Hye-Yeon Seok; Dong-Hyuk Woo; Linh Vu Nguyen; Huong T Tran; Vaishali N Tarte; Syed Muhammad Muntazir Mehdi; Sun-Young Lee; Yong-Hwan Moon
Journal:  Planta       Date:  2016-10-21       Impact factor: 4.116

10.  Genome-wide survey and expression analysis of the plant-specific NAC transcription factor family in soybean during development and dehydration stress.

Authors:  Dung Tien Le; Rie Nishiyama; Yasuko Watanabe; Keiichi Mochida; Kazuko Yamaguchi-Shinozaki; Kazuo Shinozaki; Lam-Son Phan Tran
Journal:  DNA Res       Date:  2011-06-18       Impact factor: 4.458

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