Literature DB >> 19277718

Molecular characterization of stress-inducible GmNAC genes in soybean.

Lam-Son Phan Tran1, Truyen N Quach, Satish K Guttikonda, Donavan L Aldrich, Rajesh Kumar, Anjanasree Neelakandan, Babu Valliyodan, Henry T Nguyen.   

Abstract

Drought is detrimental to plant growth and development, and often results in significant losses to the yields of economically important crops such as soybeans (Glycine max L.). NAC transcription factors (TFs), which consist of a large family of plant-specific TFs, have been reported to enhance drought tolerance in a number of plants. In this study, 31 unigenes that contain the complete open reading frames encoding GmNAC proteins were identified and cloned from soybean. Analysis of C-terminal regulatory domain using yeast one-hybrid system indicated that among 31 GmNAC proteins, 28 have transcriptional activation activity. Expression analysis of these GmNAC genes showed that they are differentially expressed in different organs, suggesting that they have diverse functions during plant growth and development. To search for the drought-inducible GmNAC genes, we prescreened and re-confirmed by quantitative real-time PCR analysis that nine GmNAC genes are induced by dehydration stress with differential induction levels in both shoot and root. The expression profiles of these nine GmNAC genes were also examined under other stresses such as high salinity, cold and with abscisic acid hormone treatments. Phylogenetic analysis of the GmNAC proteins with previously reported drought-inducible NAC proteins of Arabidopsis and rice revealed that the nine drought-inducible GmNAC proteins belong to the "stress-inducible" NAC group. The results of this systematic analysis of the GmNAC family will provide novel tools and resources for the development of improved drought tolerant transgenic soybean cultivars.

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Year:  2009        PMID: 19277718     DOI: 10.1007/s00438-009-0436-8

Source DB:  PubMed          Journal:  Mol Genet Genomics        ISSN: 1617-4623            Impact factor:   3.291


  61 in total

1.  Structure of the conserved domain of ANAC, a member of the NAC family of transcription factors.

Authors:  Heidi A Ernst; Addie Nina Olsen; Sine Larsen; Leila Lo Leggio
Journal:  EMBO Rep       Date:  2004-03       Impact factor: 8.807

Review 2.  Plant gene networks in osmotic stress response: from genes to regulatory networks.

Authors:  Lam-Son Phan Tran; Kazuo Nakashima; Kazuo Shinozaki; Kazuko Yamaguchi-Shinozaki
Journal:  Methods Enzymol       Date:  2007       Impact factor: 1.600

Review 3.  Understanding regulatory networks and engineering for enhanced drought tolerance in plants.

Authors:  Babu Valliyodan; Henry T Nguyen
Journal:  Curr Opin Plant Biol       Date:  2006-02-17       Impact factor: 7.834

4.  Systematic sequence analysis and identification of tissue-specific or stress-responsive genes of NAC transcription factor family in rice.

Authors:  Yujie Fang; Jun You; Kabin Xie; Weibo Xie; Lizhong Xiong
Journal:  Mol Genet Genomics       Date:  2008-09-24       Impact factor: 3.291

5.  Improving plant drought, salt, and freezing tolerance by gene transfer of a single stress-inducible transcription factor.

Authors:  M Kasuga; Q Liu; S Miura; K Yamaguchi-Shinozaki; K Shinozaki
Journal:  Nat Biotechnol       Date:  1999-03       Impact factor: 54.908

6.  Transcription factors in rice: a genome-wide comparative analysis between monocots and eudicots.

Authors:  Yuqing Xiong; Tieyan Liu; Chaoguang Tian; Shouhong Sun; Jiayang Li; Mingsheng Chen
Journal:  Plant Mol Biol       Date:  2005-09       Impact factor: 4.076

7.  Co-expression of the stress-inducible zinc finger homeodomain ZFHD1 and NAC transcription factors enhances expression of the ERD1 gene in Arabidopsis.

Authors:  Lam-Son Phan Tran; Kazuo Nakashima; Yoh Sakuma; Yuriko Osakabe; Feng Qin; Sean D Simpson; Kyonoshin Maruyama; Yasunari Fujita; Kazuo Shinozaki; Kazuko Yamaguchi-Shinozaki
Journal:  Plant J       Date:  2007-01       Impact factor: 6.417

8.  Two different novel cis-acting elements of erd1, a clpA homologous Arabidopsis gene function in induction by dehydration stress and dark-induced senescence.

Authors:  Sean D Simpson; Kazuo Nakashima; Yoshihiro Narusaka; Motoaki Seki; Kazuo Shinozaki; Kazuko Yamaguchi-Shinozaki
Journal:  Plant J       Date:  2003-01       Impact factor: 6.417

9.  The SHINE clade of AP2 domain transcription factors activates wax biosynthesis, alters cuticle properties, and confers drought tolerance when overexpressed in Arabidopsis.

Authors:  Asaph Aharoni; Shital Dixit; Reinhard Jetter; Eveline Thoenes; Gert van Arkel; Andy Pereira
Journal:  Plant Cell       Date:  2004-08-19       Impact factor: 11.277

10.  A dehydration-induced NAC protein, RD26, is involved in a novel ABA-dependent stress-signaling pathway.

Authors:  Miki Fujita; Yasunari Fujita; Kyonoshin Maruyama; Motoaki Seki; Keiichiro Hiratsu; Masaru Ohme-Takagi; Lam-Son Phan Tran; Kazuko Yamaguchi-Shinozaki; Kazuo Shinozaki
Journal:  Plant J       Date:  2004-09       Impact factor: 6.417

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  55 in total

1.  ENAC1, a NAC transcription factor, is an early and transient response regulator induced by abiotic stress in rice (Oryza sativa L.).

Authors:  Hui Sun; Xi Huang; Xingjun Xu; Hongxia Lan; Ji Huang; Hong-Sheng Zhang
Journal:  Mol Biotechnol       Date:  2012-10       Impact factor: 2.695

2.  The abiotic stress-responsive NAC-type transcription factor SlNAC4 regulates salt and drought tolerance and stress-related genes in tomato (Solanum lycopersicum).

Authors:  Mingku Zhu; Guoping Chen; Jianling Zhang; Yanjie Zhang; Qiaoli Xie; Zhiping Zhao; Yu Pan; Zongli Hu
Journal:  Plant Cell Rep       Date:  2014-07-26       Impact factor: 4.570

3.  Transcriptional responses to flooding stress in roots including hypocotyl of soybean seedlings.

Authors:  Yohei Nanjo; Kyonoshin Maruyama; Hiroshi Yasue; Kazuko Yamaguchi-Shinozaki; Kazuo Shinozaki; Setsuko Komatsu
Journal:  Plant Mol Biol       Date:  2011-06-08       Impact factor: 4.076

4.  Differential expression analysis of a subset of GmNAC genes in shoots of two contrasting drought-responsive soybean cultivars DT51 and MTD720 under normal and drought conditions.

Authors:  Nguyen Binh Anh Thu; Xuan Lan Thi Hoang; Hieu Doan; Thanh-Hao Nguyen; Dao Bui; Nguyen Phuong Thao; Lam-Son Phan Tran
Journal:  Mol Biol Rep       Date:  2014-07-02       Impact factor: 2.316

5.  Comprehensive analysis of NAC domain transcription factor gene family in Vitis vinifera.

Authors:  Nian Wang; Yu Zheng; Haiping Xin; Linchuan Fang; Shaohua Li
Journal:  Plant Cell Rep       Date:  2012-09-15       Impact factor: 4.570

6.  Transcription factors and glyoxylate cycle genes prominent in the transition of soybean cotyledons to the first functional leaves of the seedling.

Authors:  Md Shamimuzzaman; Lila Vodkin
Journal:  Funct Integr Genomics       Date:  2014-07-29       Impact factor: 3.410

7.  Overexpression of NAC gene from Lepidium latifolium L. enhances biomass, shortens life cycle and induces cold stress tolerance in tobacco: potential for engineering fourth generation biofuel crops.

Authors:  Atul Grover; Sadhana Singh; Pankaj Pandey; Vikas Yadav Patade; Sanjay Mohan Gupta; M Nasim
Journal:  Mol Biol Rep       Date:  2014-08-09       Impact factor: 2.316

8.  RhNAC2 and RhEXPA4 are involved in the regulation of dehydration tolerance during the expansion of rose petals.

Authors:  Fanwei Dai; Changqing Zhang; Xinqiang Jiang; Mei Kang; Xia Yin; Peitao Lü; Xiao Zhang; Yi Zheng; Junping Gao
Journal:  Plant Physiol       Date:  2012-10-23       Impact factor: 8.340

9.  In silico analysis of transcription factor repertoire and prediction of stress responsive transcription factors in soybean.

Authors:  Keiichi Mochida; Takuhiro Yoshida; Tetsuya Sakurai; Kazuko Yamaguchi-Shinozaki; Kazuo Shinozaki; Lam-Son Phan Tran
Journal:  DNA Res       Date:  2009-11-02       Impact factor: 4.458

10.  Genome-wide analysis of two-component systems and prediction of stress-responsive two-component system members in soybean.

Authors:  Keiichi Mochida; Takuhiro Yoshida; Tetsuya Sakurai; Kazuko Yamaguchi-Shinozaki; Kazuo Shinozaki; Lam-Son Phan Tran
Journal:  DNA Res       Date:  2010-09-03       Impact factor: 4.458

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