Literature DB >> 16914721

Upf1, an RNA helicase required for nonsense-mediated mRNA decay, modulates the transcriptional response to oxidative stress in fission yeast.

Miguel A Rodríguez-Gabriel1, Stephen Watt, Jürg Bähler, Paul Russell.   

Abstract

In the fission yeast Schizosaccharomyces pombe, oxidative stress triggers the activation of the Spc1/Sty1 mitogen-activated protein kinase, which in turn phosphorylates the Atf1/Pcr1 heterodimeric transcription factor to effect global changes in the patterns of gene expression. This transcriptional response is also controlled by Csx1, an RNA-binding protein that directly associates with and stabilizes atf1(+) mRNA. Here we report the surprising observation that this response also requires Upf1, a component of the nonsense-mediated mRNA decay (NMD) system. Accordingly, upf1Delta and csx1Delta strains are similarly sensitive to oxidative stress, and the effects of the mutations are not additive, suggesting that Upf1 and Csx1 work in the same pathway to stabilize atf1(+) mRNA during oxidative stress. Consistent with these observations, whole-genome expression profiling studies have shown that Upf1 controls the expression of more than 100 genes that are transcriptionally induced in response to oxidative stress, the large majority of which are also controlled by Atf1 and Csx1. The unexpected connection between an NMD factor and the oxidative stress response in fission yeast may provide important new clues about the physiological function of NMD in other species.

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Year:  2006        PMID: 16914721      PMCID: PMC1592850          DOI: 10.1128/MCB.00286-06

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  43 in total

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Authors:  T Finkel; N J Holbrook
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Review 3.  Oxidant signals and oxidative stress.

Authors:  Toren Finkel
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5.  Multiple pathways are co-regulated by the protein kinase Snf1 and the transcription factors Adr1 and Cat8.

Authors:  Elton T Young; Kenneth M Dombek; Chris Tachibana; Trey Ideker
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Journal:  Physiol Rev       Date:  2002-01       Impact factor: 37.312

7.  Fission yeast genes that confer resistance to staurosporine encode an AP-1-like transcription factor and a protein kinase related to the mammalian ERK1/MAP2 and budding yeast FUS3 and KSS1 kinases.

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9.  Distinct regulatory proteins control the graded transcriptional response to increasing H(2)O(2) levels in fission yeast Schizosaccharomyces pombe.

Authors:  Janet Quinn; Victoria J Findlay; Keren Dawson; Jonathan B A Millar; Nic Jones; Brian A Morgan; W Mark Toone
Journal:  Mol Biol Cell       Date:  2002-03       Impact factor: 4.138

10.  Global transcriptional responses of fission yeast to environmental stress.

Authors:  Dongrong Chen; W Mark Toone; Juan Mata; Rachel Lyne; Gavin Burns; Katja Kivinen; Alvis Brazma; Nic Jones; Jürg Bähler
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  35 in total

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Journal:  Mol Cancer Res       Date:  2010-02-23       Impact factor: 5.852

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3.  Hypoxic inhibition of nonsense-mediated RNA decay regulates gene expression and the integrated stress response.

Authors:  Lawrence B Gardner
Journal:  Mol Cell Biol       Date:  2008-03-24       Impact factor: 4.272

Review 4.  Nonsense-mediated mRNA decay in human cells: mechanistic insights, functions beyond quality control and the double-life of NMD factors.

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5.  The RNA surveillance protein SMG1 activates p53 in response to DNA double-strand breaks but not exogenously oxidized mRNA.

Authors:  Jennifer S Gewandter; Robert A Bambara; Michael A O'Reilly
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Review 6.  Proteins involved in the degradation of cytoplasmic mRNA in the major eukaryotic model systems.

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Review 7.  Stress and the nonsense-mediated RNA decay pathway.

Authors:  Alexandra E Goetz; Miles Wilkinson
Journal:  Cell Mol Life Sci       Date:  2017-05-13       Impact factor: 9.261

8.  Functional characterization of Upf1 targets in Schizosaccharomyces pombe.

Authors:  Ana M Matia-González; Ayesha Hasan; Gøril H Moe; Juan Mata; Miguel A Rodríguez-Gabriel
Journal:  RNA Biol       Date:  2013-04-16       Impact factor: 4.652

Review 9.  The multiple lives of NMD factors: balancing roles in gene and genome regulation.

Authors:  Olaf Isken; Lynne E Maquat
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10.  Simplified primer design for PCR-based gene targeting and microarray primer database: two web tools for fission yeast.

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