Literature DB >> 16912370

The use of the Henyey-Greenstein phase function in Monte Carlo simulations in biomedical optics.

T Binzoni1, T S Leung, A H Gandjbakhche, D Rüfenacht, D T Delpy.   

Abstract

Monte Carlo (MC) simulations are often at the heart of the testing procedure in biomedical optics. One of the critical points in MC simulations is to define the new photon direction after each scattering event. One of the most popular solutions is to use the Henyey-Greenstein phase function or some linear combinations of it. In this note, we demonstrate that randomly generating the angle defining the new direction of a photon after a collision, by means of the Henyey-Greenstein phase function, is not equivalent to generating the cosine of this angle, as is classically done. In practice, it is demonstrated that for a nearly isotropic medium (asymmetry parameter g approximately 0) this discrepancy is not large, however for an anisotropic medium as is typically found in vivo (e.g. g = 0.98) the two methods give completely different results.

Mesh:

Year:  2006        PMID: 16912370     DOI: 10.1088/0031-9155/51/17/N04

Source DB:  PubMed          Journal:  Phys Med Biol        ISSN: 0031-9155            Impact factor:   3.609


  11 in total

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2.  Intravital fluorescence imaging of mouse brain using implantable semiconductor devices and epi-illumination of biological tissue.

Authors:  Hiroaki Takehara; Yasumi Ohta; Mayumi Motoyama; Makito Haruta; Mizuki Nagasaki; Hironari Takehara; Toshihiko Noda; Kiyotaka Sasagawa; Takashi Tokuda; Jun Ohta
Journal:  Biomed Opt Express       Date:  2015-04-02       Impact factor: 3.732

3.  Using electron microscopy to calculate optical properties of biological samples.

Authors:  Wenli Wu; Andrew J Radosevich; Adam Eshein; The-Quyen Nguyen; Ji Yi; Lusik Cherkezyan; Hemant K Roy; Igal Szleifer; Vadim Backman
Journal:  Biomed Opt Express       Date:  2016-10-27       Impact factor: 3.732

Review 4.  Influence of the phase function in generalized diffuse reflectance models: review of current formalisms and novel observations.

Authors:  Katherine W Calabro; Irving J Bigio
Journal:  J Biomed Opt       Date:  2014       Impact factor: 3.170

Review 5.  Optogenetics in the nonhuman primate.

Authors:  Xue Han
Journal:  Prog Brain Res       Date:  2012       Impact factor: 2.453

6.  Beyond diffuse correlations: deciphering random flow in time-of-flight resolved light dynamics.

Authors:  V N Du Le; Vivek J Srinivasan
Journal:  Opt Express       Date:  2020-04-13       Impact factor: 3.894

7.  Noninvasive optical inhibition with a red-shifted microbial rhodopsin.

Authors:  Amy S Chuong; Mitra L Miri; Volker Busskamp; Gillian A C Matthews; Leah C Acker; Andreas T Sørensen; Andrew Young; Nathan C Klapoetke; Mike A Henninger; Suhasa B Kodandaramaiah; Masaaki Ogawa; Shreshtha B Ramanlal; Rachel C Bandler; Brian D Allen; Craig R Forest; Brian Y Chow; Xue Han; Yingxi Lin; Kay M Tye; Botond Roska; Jessica A Cardin; Edward S Boyden
Journal:  Nat Neurosci       Date:  2014-07-06       Impact factor: 24.884

8.  Simulation of near-infrared light absorption considering individual head and prefrontal cortex anatomy: implications for optical neuroimaging.

Authors:  Florian B Haeussinger; Sebastian Heinzel; Tim Hahn; Martin Schecklmann; Ann-Christine Ehlis; Andreas J Fallgatter
Journal:  PLoS One       Date:  2011-10-24       Impact factor: 3.240

9.  Measuring light scattering and absorption in corals with Inverse Spectroscopic Optical Coherence Tomography (ISOCT): a new tool for non-invasive monitoring.

Authors:  G L C Spicer; A Eid; D Wangpraseurt; T D Swain; J A Winkelmann; J Yi; M Kühl; L A Marcelino; V Backman
Journal:  Sci Rep       Date:  2019-10-02       Impact factor: 4.379

Review 10.  Recent methodology advances in fluorescence molecular tomography.

Authors:  Yu An; Kun Wang; Jie Tian
Journal:  Vis Comput Ind Biomed Art       Date:  2018-09-05
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