Literature DB >> 16908155

The evolving story of the omega subunit of bacterial RNA polymerase.

Renjith Mathew1, Dipankar Chatterji.   

Abstract

Omega (omega) is the smallest subunit of bacterial RNA polymerase (RNAP). Although identified early in RNAP research, its function remained ambiguous and shrouded by controversy for a considerable period. It has subsequently been shown that the protein has a structural role in maintenance of the conformation of the largest subunit, beta', and recruitment of beta' to the enzyme assembly. Conservation of this function across all forms of life indicates the importance of its role. Several recent observations have suggested additional functional roles for this protein and have settled some long-standing controversies surrounding it. In this context, revisiting the omega subunit story is especially interesting; here, we review the progress of omega research since its discovery and highlight the importance of these recent observations.

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Year:  2006        PMID: 16908155     DOI: 10.1016/j.tim.2006.08.002

Source DB:  PubMed          Journal:  Trends Microbiol        ISSN: 0966-842X            Impact factor:   17.079


  26 in total

1.  Inactivation of the bacterial RNA polymerase due to acquisition of secondary structure by the ω subunit.

Authors:  Paramita Sarkar; Abhijit A Sardesai; Katsuhiko S Murakami; Dipankar Chatterji
Journal:  J Biol Chem       Date:  2013-07-10       Impact factor: 5.157

Review 2.  Small things considered: the small accessory subunits of RNA polymerase in Gram-positive bacteria.

Authors:  Andy Weiss; Lindsey N Shaw
Journal:  FEMS Microbiol Rev       Date:  2015-04-14       Impact factor: 16.408

3.  Distinct pathways of RNA polymerase regulation by a phage-encoded factor.

Authors:  Daria Esyunina; Evgeny Klimuk; Konstantin Severinov; Andrey Kulbachinskiy
Journal:  Proc Natl Acad Sci U S A       Date:  2015-02-02       Impact factor: 11.205

4.  Insights from the architecture of the bacterial transcription apparatus.

Authors:  Lakshminarayan M Iyer; L Aravind
Journal:  J Struct Biol       Date:  2011-12-24       Impact factor: 2.867

5.  Helicobacter pylori RNA polymerase α-subunit C-terminal domain shows features unique to ɛ-proteobacteria and binds NikR/DNA complexes.

Authors:  Brendan N Borin; Wei Tang; Andrzej M Krezel
Journal:  Protein Sci       Date:  2014-02-04       Impact factor: 6.725

6.  The ω Subunit Governs RNA Polymerase Stability and Transcriptional Specificity in Staphylococcus aureus.

Authors:  Andy Weiss; Brittney D Moore; Miguel H J Tremblay; Dale Chaput; Astrid Kremer; Lindsey N Shaw
Journal:  J Bacteriol       Date:  2016-12-28       Impact factor: 3.490

7.  Influence of Flexible "ω" on the Activity of E. coli RNA Polymerase: A Thermodynamic Analysis.

Authors:  Debipreeta Bhowmik; Neerupma Bhardwaj; Dipankar Chatterji
Journal:  Biophys J       Date:  2017-03-14       Impact factor: 4.033

8.  X-ray crystal structure of Escherichia coli RNA polymerase σ70 holoenzyme.

Authors:  Katsuhiko S Murakami
Journal:  J Biol Chem       Date:  2013-02-06       Impact factor: 5.157

9.  RNA polymerase: a nexus of gene regulation.

Authors:  John D Helmann
Journal:  Methods       Date:  2009-01       Impact factor: 3.608

10.  In vitro genetic reconstruction of bacterial transcription initiation by coupled synthesis and detection of RNA polymerase holoenzyme.

Authors:  Haruichi Asahara; Shaorong Chong
Journal:  Nucleic Acids Res       Date:  2010-05-10       Impact factor: 16.971

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