Literature DB >> 16901760

Automated identification of adverse events related to central venous catheters.

Janet F E Penz1, Adam B Wilcox, John F Hurdle.   

Abstract

Methods for surveillance of adverse events (AEs) in clinical settings are limited by cost, technology, and appropriate data availability. In this study, two methods for semi-automated review of text records within the Veterans Administration database are utilized to identify AEs related to the placement of central venous catheters (CVCs): a Natural Language Processing program and a phrase-matching algorithm. A sample of manually reviewed records were then compared to the results of both methods to assess sensitivity and specificity. The phrase-matching algorithm was found to be a sensitive but relatively non-specific method, whereas a natural language processing system was significantly more specific but less sensitive. Positive predictive values for each method estimated the CVC-associated AE rate at this institution to be 6.4 and 6.2%, respectively. Using both methods together results in acceptable sensitivity and specificity (72.0 and 80.1%, respectively). All methods including manual chart review are limited by incomplete or inaccurate clinician documentation. A secondary finding was related to the completeness of administrative data (ICD-9 and CPT codes) used to identify intensive care unit patients in whom a CVC was placed. Administrative data identified less than 11% of patients who had a CVC placed. This suggests that other methods, including automated methods such as phrase matching, may be more sensitive than administrative data in identifying patients with devices. Considerable potential exists for the use of such methods for the identification of patients at risk, AE surveillance, and prevention of AEs through decision support technologies.

Entities:  

Mesh:

Year:  2006        PMID: 16901760     DOI: 10.1016/j.jbi.2006.06.003

Source DB:  PubMed          Journal:  J Biomed Inform        ISSN: 1532-0464            Impact factor:   6.317


  28 in total

1.  Extracting medical information from narrative patient records: the case of medication-related information.

Authors:  Louise Deléger; Cyril Grouin; Pierre Zweigenbaum
Journal:  J Am Med Inform Assoc       Date:  2010 Sep-Oct       Impact factor: 4.497

2.  The need for validation of large administrative databases: Veterans Health Administration ICD-9CM coding of exudative age-related macular degeneration and ranibizumab usage.

Authors:  Paul Latkany; Mona Duggal; Joseph Goulet; Hyung Paek; Michael Rambo; Philip Palmisano; Woody Levin; Joseph Erdos; Amy Justice; Cynthia Brandt
Journal:  J Ocul Biol Dis Infor       Date:  2010-07-09

3.  Informatics tools for the development of action-oriented triggers for outpatient adverse drug events.

Authors:  Hillary J Mull; Jonathan R Nebeker; Jonathan Rich Nebeker
Journal:  AMIA Annu Symp Proc       Date:  2008-11-06

Review 4.  An automated standardized system for managing adverse events in clinical research networks.

Authors:  Rachel L Richesson; Jamie F Malloy; Kathleen Paulus; David Cuthbertson; Jeffrey P Krischer
Journal:  Drug Saf       Date:  2008       Impact factor: 5.606

5.  Using electronic medical records to enable large-scale studies in psychiatry: treatment resistant depression as a model.

Authors:  R H Perlis; D V Iosifescu; V M Castro; S N Murphy; V S Gainer; J Minnier; T Cai; S Goryachev; Q Zeng; P J Gallagher; M Fava; J B Weilburg; S E Churchill; I S Kohane; J W Smoller
Journal:  Psychol Med       Date:  2011-06-20       Impact factor: 7.723

6.  Discovering peripheral arterial disease cases from radiology notes using natural language processing.

Authors:  Guergana K Savova; Jin Fan; Zi Ye; Sean P Murphy; Jiaping Zheng; Christopher G Chute; Iftikhar J Kullo
Journal:  AMIA Annu Symp Proc       Date:  2010-11-13

Review 7.  Natural Language Processing for EHR-Based Pharmacovigilance: A Structured Review.

Authors:  Yuan Luo; William K Thompson; Timothy M Herr; Zexian Zeng; Mark A Berendsen; Siddhartha R Jonnalagadda; Matthew B Carson; Justin Starren
Journal:  Drug Saf       Date:  2017-11       Impact factor: 5.606

8.  Identifying Peripheral Arterial Disease Cases Using Natural Language Processing of Clinical Notes.

Authors:  Naveed Afzal; Sunghwan Sohn; Sara Abram; Hongfang Liu; Iftikhar J Kullo; Adelaide M Arruda-Olson
Journal:  IEEE EMBS Int Conf Biomed Health Inform       Date:  2016-04-21

9.  Detecting Evidence of Intra-abdominal Surgical Site Infections from Radiology Reports Using Natural Language Processing.

Authors:  Alec B Chapman; Danielle L Mowery; Douglas S Swords; Wendy W Chapman; Brian T Bucher
Journal:  AMIA Annu Symp Proc       Date:  2018-04-16

10.  Developing a manually annotated clinical document corpus to identify phenotypic information for inflammatory bowel disease.

Authors:  Brett R South; Shuying Shen; Makoto Jones; Jennifer Garvin; Matthew H Samore; Wendy W Chapman; Adi V Gundlapalli
Journal:  BMC Bioinformatics       Date:  2009-09-17       Impact factor: 3.169

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