Literature DB >> 16891519

Short-sequence-repeat analysis of Mycobacterium avium subsp. paratuberculosis and Mycobacterium avium subsp. avium isolates collected from animals throughout the United States reveals both stability of loci and extensive diversity.

N Beth Harris1, Janet B Payeur, Vivek Kapur, Srinand Sreevatsan.   

Abstract

We analyzed the multilocus short sequence repeats (SSRs) of 211 and 56 isolates of Mycobacterium avium subsp. paratuberculosis and M. avium subsp. avium, respectively. The M. avium subsp. paratuberculosis isolates could be differentiated into 61 genotypes. The M. avium subsp. avium isolates showed limited diversity. These SSRs are stable and suitable for studying the molecular epidemiology of M. avium subsp. paratuberculosis.

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Year:  2006        PMID： 16891519      PMCID： PMC1594651          DOI： 10.1128/JCM.00584-06

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  18 in total

1.  Variable-number tandem repeat typing of Mycobacterium tuberculosis isolates with low copy numbers of IS6110 by using mycobacterial interspersed repetitive units.

Authors:  Lauren Steinlein Cowan; Laura Mosher; Lois Diem; Jeffrey P Massey; Jack T Crawford
Journal:  J Clin Microbiol       Date:  2002-05       Impact factor: 5.948

Review 2.  Clinical approach to control of bovine paratuberculosis.

Authors:  M T Collins
Journal:  J Am Vet Med Assoc       Date:  1994-01-15       Impact factor: 1.936

Review 3.  Infections due to non-tuberculous mycobacteria (NTM).

Authors:  V M Katoch
Journal:  Indian J Med Res       Date:  2004-10       Impact factor: 2.375

4.  Distribution and characterization of staphylococcal interspersed repeat units (SIRUs) and potential use for strain differentiation.

Authors:  K J Hardy; D W Ussery; B A Oppenheim; P M Hawkey
Journal:  Microbiology       Date:  2004-12       Impact factor: 2.777

5.  Variable number of tandem repeats in Salmonella enterica subsp. enterica for typing purposes.

Authors:  Vincent Ramisse; Perrine Houssu; Eric Hernandez; France Denoeud; Valérie Hilaire; Olivier Lisanti; Françoise Ramisse; Jean-Didier Cavallo; Gilles Vergnaud
Journal:  J Clin Microbiol       Date:  2004-12       Impact factor: 5.948

Review 6.  Mycobacterium avium complex in patients with HIV infection in the era of highly active antiretroviral therapy.

Authors:  Petros C Karakousis; Richard D Moore; Richard E Chaisson
Journal:  Lancet Infect Dis       Date:  2004-09       Impact factor: 25.071

7.  Molecular epidemiology of Mycobacterium avium subsp. paratuberculosis isolates recovered from wild animal species.

Authors:  Alifiya S Motiwala; Alongkorn Amonsin; Megan Strother; Elizabeth J B Manning; Vivek Kapur; Srinand Sreevatsan
Journal:  J Clin Microbiol       Date:  2004-04       Impact factor: 5.948

Review 8.  Transmission of paratuberculosis.

Authors:  R W Sweeney
Journal:  Vet Clin North Am Food Anim Pract       Date:  1996-07       Impact factor: 3.357

9.  Genome-wide analysis of synonymous single nucleotide polymorphisms in Mycobacterium tuberculosis complex organisms: resolution of genetic relationships among closely related microbial strains.

Authors:  Michaela M Gutacker; James C Smoot; Cristi A Lux Migliaccio; Stacy M Ricklefs; Su Hua; Debby V Cousins; Edward A Graviss; Elena Shashkina; Barry N Kreiswirth; James M Musser
Journal:  Genetics       Date:  2002-12       Impact factor: 4.562

10.  Characterization by restriction endonuclease analysis and DNA hybridization using IS900 of bovine, ovine, caprine and human dependent strains of Mycobacterium paratuberculosis isolated in various localities.

Authors:  I Pavlík; L Bejcková; M Pavlas; Z Rozsypalová; S Kosková
Journal:  Vet Microbiol       Date:  1995-08       Impact factor: 3.293
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  14 in total

1.  Genotypes of Mycobacterium avium subsp. paratuberculosis from South American countries determined by two methods based on genomic repetitive sequences.

Authors:  Jorge Arturo Fernández-Silva; Amir Abdulmawjood; Ömer Akineden; Michael Bülte
Journal:  Trop Anim Health Prod       Date:  2012-02-02       Impact factor: 1.559

2.  Quantification of Mycobacterium avium subsp. paratuberculosis strains representing distinct genotypes and isolated from domestic and wildlife animal species by use of an automatic liquid culture system.

Authors:  Naiara Abendaño; Iker Sevilla; José M Prieto; Joseba M Garrido; Ramon A Juste; Marta Alonso-Hearn
Journal:  J Clin Microbiol       Date:  2012-05-30       Impact factor: 5.948

3.  Combined multilocus short-sequence-repeat and mycobacterial interspersed repetitive unit-variable-number tandem-repeat typing of Mycobacterium avium subsp. paratuberculosis isolates.

Authors:  Virginie C Thibault; Maggy Grayon; Maria Laura Boschiroli; Eve Willery; Caroline Allix-Béguec; Karen Stevenson; Franck Biet; Philip Supply
Journal:  J Clin Microbiol       Date:  2008-10-15       Impact factor: 5.948

4.  Molecular epidemiology of Mycobacterium avium subsp. paratuberculosis in a longitudinal study of three dairy herds.

Authors:  Abani K Pradhan; Rebecca M Mitchell; Aagje J Kramer; Michael J Zurakowski; Terry L Fyock; Robert H Whitlock; Julia M Smith; Ernest Hovingh; Jo Ann S Van Kessel; Jeffrey S Karns; Ynte H Schukken
Journal:  J Clin Microbiol       Date:  2011-01-05       Impact factor: 5.948

5.  Amplified fragment length polymorphism reveals specific epigenetic distinctions between Mycobacterium avium subspecies paratuberculosis isolates of various isolation types.

Authors:  B O'Shea; S Khare; P Klein; A Roussel; L G Adams; T A Ficht; A C Rice-Ficht
Journal:  J Clin Microbiol       Date:  2011-04-06       Impact factor: 5.948

6.  Suspicion of Mycobacterium avium subsp. paratuberculosis transmission between cattle and wild-living red deer (Cervus elaphus) by multitarget genotyping.

Authors:  Isabel Fritsch; Gabriele Luyven; Heike Köhler; Walburga Lutz; Petra Möbius
Journal:  Appl Environ Microbiol       Date:  2011-12-16       Impact factor: 4.792

7.  Influence of type of culture medium on characterization of Mycobacterium avium subsp. paratuberculosis subtypes.

Authors:  N Cernicchiaro; S J Wells; H Janagama; S Sreevatsan
Journal:  J Clin Microbiol       Date:  2007-10-24       Impact factor: 5.948

8.  Genetic structure of Mycobacterium avium subsp. paratuberculosis population in cattle herds in Quebec as revealed by using a combination of multilocus genomic analyses.

Authors:  Jagdip Singh Sohal; Julie Arsenault; Olivia Labrecque; Julie-Hélène Fairbrother; Jean-Philippe Roy; Gilles Fecteau; Yvan L'Homme
Journal:  J Clin Microbiol       Date:  2014-05-14       Impact factor: 5.948

9.  Evaluation of three molecular methods of repetitive element loci for differentiation of Mycobacterium avium subsp. paratuberculosis (MAP).

Authors:  Amr El-Sayed; Abdulwahed Ahmed Hassan; Saleh Natour; Amir Abdulmawjood; Michael Bülte; Wilfried Wolter; Michael Zschöck
Journal:  J Microbiol       Date:  2009-06-26       Impact factor: 3.422

10.  Isolation of Mycobacterium avium subspecies paratuberculosis from Ugandan cattle and strain differentiation using optimised DNA typing techniques.

Authors:  Julius Boniface Okuni; Chrysostomos I Dovas; Panayiotis Loukopoulos; Ilias G Bouzalas; David Patrick Kateete; Moses L Joloba; Lonzy Ojok
Journal:  BMC Vet Res       Date:  2012-06-29       Impact factor: 2.741
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