Literature DB >> 18923016

Combined multilocus short-sequence-repeat and mycobacterial interspersed repetitive unit-variable-number tandem-repeat typing of Mycobacterium avium subsp. paratuberculosis isolates.

Virginie C Thibault1, Maggy Grayon, Maria Laura Boschiroli, Eve Willery, Caroline Allix-Béguec, Karen Stevenson, Franck Biet, Philip Supply.   

Abstract

Short-sequence-repeat (SSR) sequencing was applied to 127 Mycobacterium avium subsp. paratuberculosis isolates typed by mycobacterial interspersed repetitive unit-variable-number tandem repeats (MIRU-VNTR) and IS900 restriction fragment length polymorphism (RFLP). Combined MIRU-VNTR and SSR typing followed by secondary IS900 RFLP typing is an improved approach to high-resolution genotyping of this pathogen.

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Year:  2008        PMID： 18923016      PMCID： PMC2593263          DOI： 10.1128/JCM.01349-08

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  26 in total

1.  Herd-level economic losses associated with Johne's disease on US dairy operations.

Authors:  S L Ott; S J Wells; B A Wagner
Journal:  Prev Vet Med       Date:  1999-06-11       Impact factor: 2.670

Review 2.  Does Mycobacterium avium subspecies paratuberculosis cause Crohn's disease?

Authors:  R Balfour Sartor
Journal:  Gut       Date:  2005-07       Impact factor: 23.059

Review 3.  Multiple-locus variable number tandem repeats analysis for genetic fingerprinting of pathogenic bacteria.

Authors:  Bjørn-Arne Lindstedt
Journal:  Electrophoresis       Date:  2005-06       Impact factor: 3.535

4.  Multilocus variable-number tandem repeat typing of Mycobacterium ulcerans.

Authors:  Anthony Ablordey; Jean Swings; Christine Hubans; Karim Chemlal; Camille Locht; Françoise Portaels; Philip Supply
Journal:  J Clin Microbiol       Date:  2005-04       Impact factor: 5.948

5.  Molecular diversity in Bacillus anthracis.

Authors:  P Keim; A M Klevytska; L B Price; J M Schupp; G Zinser; K L Smith; M E Hugh-Jones; R Okinaka; K K Hill; P J Jackson
Journal:  J Appl Microbiol       Date:  1999-08       Impact factor: 3.772

6.  Use of multilocus variable-number tandem-repeat analysis for typing Mycobacterium avium subsp. paratuberculosis.

Authors:  Pieter Overduin; Leo Schouls; Paul Roholl; Adri van der Zanden; Nofel Mahmmod; Arnold Herrewegh; Dick van Soolingen
Journal:  J Clin Microbiol       Date:  2004-11       Impact factor: 5.948

7.  Mycobacterium avium subsp. paratuberculosis strains isolated from Crohn's disease patients and animal species exhibit similar polymorphic locus patterns.

Authors:  Alifiya H Ghadiali; Megan Strother; Saleh A Naser; Elizabeth J B Manning; Srinand Sreevatsan
Journal:  J Clin Microbiol       Date:  2004-11       Impact factor: 5.948

8.  Multilocus short sequence repeat sequencing approach for differentiating among Mycobacterium avium subsp. paratuberculosis strains.

Authors:  Alongkorn Amonsin; Ling Ling Li; Qing Zhang; John P Bannantine; Alifiya S Motiwala; Srinand Sreevatsan; Vivek Kapur
Journal:  J Clin Microbiol       Date:  2004-04       Impact factor: 5.948

9.  Molecular epidemiology of Mycobacterium avium subsp. paratuberculosis isolates recovered from wild animal species.

Authors:  Alifiya S Motiwala; Alongkorn Amonsin; Megan Strother; Elizabeth J B Manning; Vivek Kapur; Srinand Sreevatsan
Journal:  J Clin Microbiol       Date:  2004-04       Impact factor: 5.948

10.  Genetic diversity in the Mycobacterium tuberculosis complex based on variable numbers of tandem DNA repeats.

Authors:  R Frothingham; W A Meeker-O'Connell
Journal:  Microbiology       Date:  1998-05       Impact factor: 2.777
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  21 in total

1.  Genotypes of Mycobacterium avium subsp. paratuberculosis from South American countries determined by two methods based on genomic repetitive sequences.

Authors:  Jorge Arturo Fernández-Silva; Amir Abdulmawjood; Ömer Akineden; Michael Bülte
Journal:  Trop Anim Health Prod       Date:  2012-02-02       Impact factor: 1.559

2.  Suspicion of Mycobacterium avium subsp. paratuberculosis transmission between cattle and wild-living red deer (Cervus elaphus) by multitarget genotyping.

Authors:  Isabel Fritsch; Gabriele Luyven; Heike Köhler; Walburga Lutz; Petra Möbius
Journal:  Appl Environ Microbiol       Date:  2011-12-16       Impact factor: 4.792

3.  Improved short-sequence-repeat genotyping of Mycobacterium avium subsp. paratuberculosis by using matrix-assisted laser desorption ionization-time of flight mass spectrometry.

Authors:  Christina Ahlstrom; Herman W Barkema; Jeroen De Buck
Journal:  Appl Environ Microbiol       Date:  2013-11-08       Impact factor: 4.792

4.  Variable-number tandem-repeat markers for typing Mycobacterium intracellulare strains isolated in humans.

Authors:  Frédéric-Antoine Dauchy; Sébastien Dégrange; Alain Charron; Michel Dupon; Yi Xin; Cécile Bébéar; Jeanne Maugein
Journal:  BMC Microbiol       Date:  2010-03-29       Impact factor: 3.605

5.  Genetic structure of Mycobacterium avium subsp. paratuberculosis population in cattle herds in Quebec as revealed by using a combination of multilocus genomic analyses.

Authors:  Jagdip Singh Sohal; Julie Arsenault; Olivia Labrecque; Julie-Hélène Fairbrother; Jean-Philippe Roy; Gilles Fecteau; Yvan L'Homme
Journal:  J Clin Microbiol       Date:  2014-05-14       Impact factor: 5.948

6.  Evaluation of three molecular methods of repetitive element loci for differentiation of Mycobacterium avium subsp. paratuberculosis (MAP).

Authors:  Amr El-Sayed; Abdulwahed Ahmed Hassan; Saleh Natour; Amir Abdulmawjood; Michael Bülte; Wilfried Wolter; Michael Zschöck
Journal:  J Microbiol       Date:  2009-06-26       Impact factor: 3.422

7.  Determination of genotypic diversity of Mycobacterium avium subspecies from human and animal origins by mycobacterial interspersed repetitive-unit-variable-number tandem-repeat and IS1311 restriction fragment length polymorphism typing methods.

Authors:  Nicolas Radomski; Virginie C Thibault; Claudine Karoui; Krystel de Cruz; Thierry Cochard; Cristina Gutiérrez; Philip Supply; Frank Biet; María Laura Boschiroli
Journal:  J Clin Microbiol       Date:  2010-01-27       Impact factor: 5.948

8.  Genome sequencing of ovine isolates of Mycobacterium avium subspecies paratuberculosis offers insights into host association.

Authors:  John P Bannantine; Chia-wei Wu; Chungyi Hsu; Shiguo Zhou; David C Schwartz; Darrell O Bayles; Michael L Paustian; David P Alt; Srinand Sreevatsan; Vivek Kapur; Adel M Talaat
Journal:  BMC Genomics       Date:  2012-03-12       Impact factor: 3.969

9.  Inter- and intra-subtype genotypic differences that differentiate Mycobacterium avium subspecies paratuberculosis strains.

Authors:  Franck Biet; Iker A Sevilla; Thierry Cochard; Louise H Lefrançois; Joseba M Garrido; Ian Heron; Ramón A Juste; Joyce McLuckie; Virginie C Thibault; Philip Supply; Desmond M Collins; Marcel A Behr; Karen Stevenson
Journal:  BMC Microbiol       Date:  2012-11-19       Impact factor: 3.605

10.  Occurrence of Mycobacterium avium subspecies paratuberculosis across host species and European countries with evidence for transmission between wildlife and domestic ruminants.

Authors:  Karen Stevenson; Julio Alvarez; Douwe Bakker; Franck Biet; Lucia de Juan; Susan Denham; Zoi Dimareli; Karen Dohmann; Gerald F Gerlach; Ian Heron; Marketa Kopecna; Linda May; Ivo Pavlik; J Michael Sharp; Virginie C Thibault; Peter Willemsen; Ruth N Zadoks; Alastair Greig
Journal:  BMC Microbiol       Date:  2009-10-07       Impact factor: 3.605
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