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Literature DB >> 16888665

Design and implementation of a library-based information service in molecular biology and genetics at the University of Pittsburgh.

Ansuman Chattopadhyay¹, Nancy Hrinya Tannery, Deborah A L Silverman, Phillip Bergen, Barbara A Epstein.

Abstract

SETTING: In summer 2002, the Health Sciences Library System (HSLS) at the University of Pittsburgh initiated an information service in molecular biology and genetics to assist researchers with identifying and utilizing bioinformatics tools. PROGRAM COMPONENTS: This novel information service comprises hands-on training workshops and consultation on the use of bioinformatics tools. The HSLS also provides an electronic portal and networked access to public and commercial molecular biology databases and software packages. EVALUATION MECHANISMS: Researcher feedback gathered during the first three years of workshops and individual consultation indicate that the information service is meeting user needs. NEXT STEPS/FUTURE DIRECTIONS: The service's workshop offerings will expand to include emerging bioinformatics topics. A frequently asked questions database is also being developed to reuse advice on complex bioinformatics questions.

Mesh：

Year: 2006 PMID： 16888665 PMCID： PMC1525320

Source DB: PubMed Journal: J Med Libr Assoc ISSN： 1536-5050

15 in total

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Authors: T K Jenssen; A Laegreid; J Komorowski; E Hovig
Journal: Nat Genet Date: 2001-05 Impact factor: 38.330

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Authors: S Yarfitz; D S Ketchell
Journal: Bull Med Libr Assoc Date: 2000-01

3. The UCSC Genome Browser Database.

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Journal: Nucleic Acids Res Date: 2003-01-01 Impact factor: 16.971

4. The Molecular Biology Database Collection: 2003 update.

Authors: Andreas D Baxevanis
Journal: Nucleic Acids Res Date: 2003-01-01 Impact factor: 16.971

5. The Ensembl Web site: mechanics of a genome browser.

Authors: James Stalker; Brian Gibbins; Patrick Meidl; James Smith; William Spooner; Hans-Rudolf Hotz; Antony V Cox
Journal: Genome Res Date: 2004-05 Impact factor: 9.043

6. Analysis for free: comparing programs for sequence analysis.

Authors: Helge-Friedrich Tippmann
Journal: Brief Bioinform Date: 2004-03 Impact factor: 11.622

7. Basic local alignment search tool.

Authors: S F Altschul; W Gish; W Miller; E W Myers; D J Lipman
Journal: J Mol Biol Date: 1990-10-05 Impact factor: 5.469

8. Database resources of the National Center for Biotechnology Information: 2002 update.

Authors: David L Wheeler; Deanna M Church; Alex E Lash; Detlef D Leipe; Thomas L Madden; Joan U Pontius; Gregory D Schuler; Lynn M Schriml; Tatiana A Tatusova; Lukas Wagner; Barbara A Rapp
Journal: Nucleic Acids Res Date: 2002-01-01 Impact factor: 16.971

9. Molecular and functional characterization of a novel splice variant of ANKHD1 that lacks the KH domain and its role in cell survival and apoptosis.

Authors: Melissa C Miles; Michelle L Janket; Elizabeth D A Wheeler; Ansuman Chattopadhyay; Biswanath Majumder; Jeremy Dericco; Elizabeth A Schafer; Velpandi Ayyavoo
Journal: FEBS J Date: 2005-08 Impact factor: 5.542

10. Analysis of transcriptional regulation of the small leucine rich proteoglycans.

Authors: Elena S Tasheva; Bernward Klocke; Gary W Conrad
Journal: Mol Vis Date: 2004-10-07 Impact factor: 2.367

12 in total

1. Carving a niche: establishing bioinformatics collaborations.

Authors: Jennifer A Lyon; Michele R Tennant; Kevin R Messner; David L Osterbur
Journal: J Med Libr Assoc Date: 2006-07

2. A Web-based assessment of bioinformatics end-user support services at US universities.

Authors: Donna J Messersmith; Dennis A Benson; Renata C Geer
Journal: J Med Libr Assoc Date: 2006-07

3. Broad issues to consider for library involvement in bioinformatics.

Authors: Renata C Geer
Journal: J Med Libr Assoc Date: 2006-07

Review 4. The emerging informationist specialty: a systematic review of the literature.

Authors: Jocelyn A Rankin; Suzanne F Grefsheim; Candace C Canto
Journal: J Med Libr Assoc Date: 2008-07

5. Expanding roles in a library-based bioinformatics service program: a case study.

Authors: Meng Li; Yi-Bu Chen; William A Clintworth
Journal: J Med Libr Assoc Date: 2013-10

6. Informationist programme in support of biomedical research: a programme description and preliminary findings of an evaluation.

Authors: Susan C Whitmore; Suzanne F Grefsheim; Jocelyn A Rankin
Journal: Health Info Libr J Date: 2008-06

7. Evidence-based Medicine Search: a customizable federated search engine.

Authors: Paul J Bracke; David K Howse; Samuel M Keim
Journal: J Med Libr Assoc Date: 2008-04

8. The informationist: building evidence for an emerging health profession.

Authors: Suzanne F Grefsheim; Susan C Whitmore; Barbara A Rapp; Jocelyn A Rankin; Rex R Robison; Candace C Canto
Journal: J Med Libr Assoc Date: 2010-04

9. The Online Bioinformatics Resources Collection at the University of Pittsburgh Health Sciences Library System--a one-stop gateway to online bioinformatics databases and software tools.

Authors: Yi-Bu Chen; Ansuman Chattopadhyay; Phillip Bergen; Cynthia Gadd; Nancy Tannery
Journal: Nucleic Acids Res Date: 2006-11-15 Impact factor: 16.971

10. Bioinformatic training needs at a health sciences campus.

Authors: Jeffrey C Oliver
Journal: PLoS One Date: 2017-06-14 Impact factor: 3.240