Literature DB >> 16880956

Proteomics technology in systems biology.

Jeffrey C Smith1, Daniel Figeys.   

Abstract

It has now become apparent that a full understanding of a biological process (e.g. a disease state) is only possible if all biomolecular interactions are taken into account. Systems biology works towards understanding the intricacies of cellular life through the collaborative efforts of biologists, chemists, mathematicians and computer scientists and recently, a number of laboratories around the world have embarked upon such research agendas. The fields of genomics and proteomics are foundational in systems biology studies and a great deal of research is currently being conducted in each worldwide. Moreover, many technological advances (particularly in mass spectrometry) have led to a dramatic rise in the number of proteomic studies over the past two decades. This short review summarizes a selection of technological innovations in proteomics that contribute to systems biology studies.

Mesh:

Year:  2006        PMID: 16880956     DOI: 10.1039/b606798k

Source DB:  PubMed          Journal:  Mol Biosyst        ISSN: 1742-2051


  9 in total

Review 1.  Post-genomics nanotechnology is gaining momentum: nanoproteomics and applications in life sciences.

Authors:  Firas H Kobeissy; Basri Gulbakan; Ali Alawieh; Pierre Karam; Zhiqun Zhang; Joy D Guingab-Cagmat; Stefania Mondello; Weihong Tan; John Anagli; Kevin Wang
Journal:  OMICS       Date:  2014-01-10

2.  Unraveling human complexity and disease with systems biology and personalized medicine.

Authors:  Stephen Naylor; Jake Y Chen
Journal:  Per Med       Date:  2010-05       Impact factor: 2.512

3.  Aerobic Exercises Induce Antioxidant Pathways Activation in Rats.

Authors:  Najmeh Barghi; Effat Bambaeichi; Mostafa Rezaei-Tavirani; Neda Khaledi
Journal:  Int J Prev Med       Date:  2020-09-05

Review 4.  Systems biology coupled with label-free high-throughput detection as a novel approach for diagnosis of chronic obstructive pulmonary disease.

Authors:  Joanna L Richens; Richard A Urbanowicz; Elizabeth A M Lunt; Rebecca Metcalf; Jonathan Corne; Lucy Fairclough; Paul O'Shea
Journal:  Respir Res       Date:  2009-04-22

5.  Reactive landing of gas-phase ions as a tool for the fabrication of metal oxide surfaces for in situ phosphopeptide enrichment.

Authors:  Grady R Blacken; Michael Volný; Matthew Diener; Karl E Jackson; Pratistha Ranjitkar; Dustin J Maly; Frantisek Turecek
Journal:  J Am Soc Mass Spectrom       Date:  2009-01-22       Impact factor: 3.109

Review 6.  The Methods Employed in Mass Spectrometric Analysis of Posttranslational Modifications (PTMs) and Protein-Protein Interactions (PPIs).

Authors:  Rama R Yakubu; Edward Nieves; Louis M Weiss
Journal:  Adv Exp Med Biol       Date:  2019       Impact factor: 2.622

7.  Proteomic Analysis of the Xanthan-Degrading Pathway of Microbacterium sp. XT11.

Authors:  Zhen Sun; Huixue Liu; Xueyan Wang; Fan Yang; Xianzhen Li
Journal:  ACS Omega       Date:  2019-11-06

8.  Exploiting proteomic data for genome annotation and gene model validation in Aspergillus niger.

Authors:  James C Wright; Deana Sugden; Sue Francis-McIntyre; Isabel Riba-Garcia; Simon J Gaskell; Igor V Grigoriev; Scott E Baker; Robert J Beynon; Simon J Hubbard
Journal:  BMC Genomics       Date:  2009-02-04       Impact factor: 3.969

9.  An emerging cyberinfrastructure for biodefense pathogen and pathogen-host data.

Authors:  C Zhang; O Crasta; S Cammer; R Will; R Kenyon; D Sullivan; Q Yu; W Sun; R Jha; D Liu; T Xue; Y Zhang; M Moore; P McGarvey; H Huang; Y Chen; J Zhang; R Mazumder; C Wu; B Sobral
Journal:  Nucleic Acids Res       Date:  2007-11-04       Impact factor: 16.971

  9 in total

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