Literature DB >> 16877063

Chlorella viruses.

Takashi Yamada1, Hideki Onimatsu, James L Van Etten.   

Abstract

Chlorella viruses or chloroviruses are large, icosahedral, plaque-forming, double-stranded-DNA-containing viruses that replicate in certain strains of the unicellular green alga Chlorella. DNA sequence analysis of the 330-kbp genome of Paramecium bursaria chlorella virus 1 (PBCV-1), the prototype of this virus family (Phycodnaviridae), predict approximately 366 protein-encoding genes and 11 tRNA genes. The predicted gene products of approximately 50% of these genes resemble proteins of known function, including many that are completely unexpected for a virus. In addition, the chlorella viruses have several features and encode many gene products that distinguish them from most viruses. These products include: (1) multiple DNA methyltransferases and DNA site-specific endonucleases, (2) the enzymes required to glycosylate their proteins and synthesize polysaccharides such as hyaluronan and chitin, (3) a virus-encoded K(+) channel (called Kcv) located in the internal membrane of the virions, (4) a SET domain containing protein (referred to as vSET) that dimethylates Lys27 in histone 3, and (5) PBCV-1 has three types of introns; a self-splicing intron, a spliceosomal processed intron, and a small tRNA intron. Accumulating evidence indicates that the chlorella viruses have a very long evolutionary history. This review mainly deals with research on the virion structure, genome rearrangements, gene expression, cell wall degradation, polysaccharide synthesis, and evolution of PBCV-1 as well as other related viruses.

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Year:  2006        PMID: 16877063      PMCID: PMC1955756          DOI: 10.1016/S0065-3527(06)66006-5

Source DB:  PubMed          Journal:  Adv Virus Res        ISSN: 0065-3527            Impact factor:   9.937


  143 in total

1.  Immediate early genes expressed in chlorovirus infections.

Authors:  Takeru Kawasaki; Masahiro Tanaka; Makoto Fujie; Shoji Usami; Takashi Yamada
Journal:  Virology       Date:  2004-01-05       Impact factor: 3.616

2.  Vp130, a chloroviral surface protein that interacts with the host Chlorella cell wall.

Authors:  Hideki Onimatsu; Ichiro Sugimoto; Makoto Fujie; Shoji Usami; Takashi Yamada
Journal:  Virology       Date:  2004-02-05       Impact factor: 3.616

Review 3.  The viriosphere, diversity, and genetic exchange within phage communities.

Authors:  Emma Hambly; Curtis A Suttle
Journal:  Curr Opin Microbiol       Date:  2005-08       Impact factor: 7.934

Review 4.  Are chlorella viruses a rich source of ion channel genes?

Authors:  Ming Kang; Anna Moroni; Sabrina Gazzarrini; James L Van Etten
Journal:  FEBS Lett       Date:  2003-09-18       Impact factor: 4.124

5.  Screening of natural waters for viruses which infect chlorella cells.

Authors:  T Yamada; T Higashiyama; T Fukuda
Journal:  Appl Environ Microbiol       Date:  1991-12       Impact factor: 4.792

6.  Isolation and characterization of two viruses with large genome size infecting Chrysochromulina ericina (Prymnesiophyceae) and Pyramimonas orientalis (Prasinophyceae).

Authors:  R A Sandaa; M Heldal; T Castberg; R Thyrhaug; G Bratbak
Journal:  Virology       Date:  2001-11-25       Impact factor: 3.616

7.  DNA methylation of viruses infecting a eukaryotic Chlorella-like green alga.

Authors:  J L Van Etten; A M Schuster; L Girton; D E Burbank; D Swinton; S Hattman
Journal:  Nucleic Acids Res       Date:  1985-05-24       Impact factor: 16.971

8.  A viral member of the ERV1/ALR protein family participates in a cytoplasmic pathway of disulfide bond formation.

Authors:  T G Senkevich; C L White; E V Koonin; B Moss
Journal:  Proc Natl Acad Sci U S A       Date:  2000-10-24       Impact factor: 11.205

9.  Genetic variation of chlorella viruses: variable regions localized on the CVK2 genomic DNA.

Authors:  K Nishida; Y Kimura; T Kawasaki; M Fujie; T Yamada
Journal:  Virology       Date:  1999-03-15       Impact factor: 3.616

10.  Structural proteins and lipids in a virus, PBCV-1, which replicates in a Chlorella-like alga.

Authors:  M P Skrdla; D E Burbank; Y Xia; R H Meints; J L Van Etten
Journal:  Virology       Date:  1984-06       Impact factor: 3.616

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  56 in total

1.  Vaccinia-like cytoplasmic replication of the giant Mimivirus.

Authors:  Yael Mutsafi; Nathan Zauberman; Ilana Sabanay; Abraham Minsky
Journal:  Proc Natl Acad Sci U S A       Date:  2010-03-15       Impact factor: 11.205

2.  Giant virus with a remarkable complement of genes infects marine zooplankton.

Authors:  Matthias G Fischer; Michael J Allen; William H Wilson; Curtis A Suttle
Journal:  Proc Natl Acad Sci U S A       Date:  2010-10-25       Impact factor: 11.205

3.  Crystal structure of a virus-encoded putative glycosyltransferase.

Authors:  Ye Xiang; Ulrich Baxa; Ying Zhang; Alasdair C Steven; Gentry L Lewis; James L Van Etten; Michael G Rossmann
Journal:  J Virol       Date:  2010-09-22       Impact factor: 5.103

4.  Chlorella viruses contain genes encoding a complete polyamine biosynthetic pathway.

Authors:  Sascha Baumann; Adrianne Sander; James R Gurnon; Giane M Yanai-Balser; James L Van Etten; Markus Piotrowski
Journal:  Virology       Date:  2006-11-13       Impact factor: 3.616

Review 5.  Dinoflagellates, diatoms, and their viruses.

Authors:  Keizo Nagasaki
Journal:  J Microbiol       Date:  2008-07-05       Impact factor: 3.422

6.  Viral metagenomics analysis of planktonic viruses in East Lake, Wuhan, China.

Authors:  Xingyi Ge; Yongquan Wu; Meiniang Wang; Jun Wang; Lijun Wu; Xinglou Yang; Yuji Zhang; Zhengli Shi
Journal:  Virol Sin       Date:  2013-09-30       Impact factor: 4.327

Review 7.  DNA virus replication compartments.

Authors:  Melanie Schmid; Thomas Speiseder; Thomas Dobner; Ramon A Gonzalez
Journal:  J Virol       Date:  2013-11-20       Impact factor: 5.103

8.  Sequence and annotation of the 288-kb ATCV-1 virus that infects an endosymbiotic chlorella strain of the heliozoon Acanthocystis turfacea.

Authors:  Lisa A Fitzgerald; Michael V Graves; Xiao Li; James Hartigan; Artur J P Pfitzner; Ella Hoffart; James L Van Etten
Journal:  Virology       Date:  2007-02-05       Impact factor: 3.616

9.  An icosahedral algal virus has a complex unique vertex decorated by a spike.

Authors:  Mickaël V Cherrier; Victor A Kostyuchenko; Chuan Xiao; Valorie D Bowman; Anthony J Battisti; Xiaodong Yan; Paul R Chipman; Timothy S Baker; James L Van Etten; Michael G Rossmann
Journal:  Proc Natl Acad Sci U S A       Date:  2009-06-18       Impact factor: 11.205

Review 10.  The Phycodnaviridae: the story of how tiny giants rule the world.

Authors:  W H Wilson; J L Van Etten; M J Allen
Journal:  Curr Top Microbiol Immunol       Date:  2009       Impact factor: 4.291

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