Literature DB >> 16866617

Focus on success: using a probabilistic approach to achieve an optimal balance of compound properties in drug discovery.

Matt D Segall1, Alan P Beresford, Joelle Mr Gola, Dan Hawksley, Mike H Tarbit.   

Abstract

The success of any drug will depend on how closely it achieves an ideal combination of potency, selectivity, pharmacokinetics and safety. The key to achieving this success efficiently is to consider the overall balance of molecular properties of compounds against the ideal profile for the therapeutic indication from the earliest stages of a drug discovery project. The use of in silico predictive models of absorption, distribution, metabolism and elimination (ADME) and physicochemical properties is a major aid in this exercise, as it enables virtual molecules to be assessed across a broad range of properties from initial library generation, through to candidate selection. Of course, no measurement, whether in silico, in vitro or in vivo, is perfect and the uncertainties in any data should be explicitly taken into account when basing conclusions on test results. In addition, in the early stages of drug discovery, when designing a library that is lead seeking or building compound structure-activity relationships, the quality of any set of molecules should also be balanced against the chemical diversity covered. Here, a scheme is presented for achieving these goals based on a suite of predictive ADME models, probabilistic scoring and multiobjective optimisation for library design. The use of this platform for applications in lead identification and optimisation is illustrated.

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Year:  2006        PMID: 16866617     DOI: 10.1517/17425255.2.2.325

Source DB:  PubMed          Journal:  Expert Opin Drug Metab Toxicol        ISSN: 1742-5255            Impact factor:   4.481


  10 in total

1.  The challenges of making decisions using uncertain data.

Authors:  Matthew D Segall; Edmund J Champness
Journal:  J Comput Aided Mol Des       Date:  2015-07-01       Impact factor: 3.686

2.  Time dependent analysis of assay comparability: a novel approach to understand intra- and inter-site variability over time.

Authors:  Susanne Winiwarter; Brian Middleton; Barry Jones; Paul Courtney; Bo Lindmark; Ken M Page; Alan Clark; Claire Landqvist
Journal:  J Comput Aided Mol Des       Date:  2015-02-20       Impact factor: 3.686

Review 3.  From flamingo dance to (desirable) drug discovery: a nature-inspired approach.

Authors:  Aminael Sánchez-Rodríguez; Yunierkis Pérez-Castillo; Stephan C Schürer; Orazio Nicolotti; Giuseppe Felice Mangiatordi; Fernanda Borges; M Natalia D S Cordeiro; Eduardo Tejera; José L Medina-Franco; Maykel Cruz-Monteagudo
Journal:  Drug Discov Today       Date:  2017-06-15       Impact factor: 7.851

4.  Treponema pallidum putative novel drug target identification and validation: rethinking syphilis therapeutics with plant-derived terpenoids.

Authors:  Upendra N Dwivedi; Sameeksha Tiwari; Priyanka Singh; Swati Singh; Manika Awasthi; Veda P Pandey
Journal:  OMICS       Date:  2015-02

5.  Identification of 1,2,4-Oxadiazoles-Based Novel EGFR Inhibitors: Molecular Dynamics Simulation-Guided Identification and in vitro ADME Studies.

Authors:  Vishal Unadkat; Shishir Rohit; Paranjay Parikh; Kaushal Patel; Vinod Sanna; Sanjay Singh
Journal:  Onco Targets Ther       Date:  2022-05-02       Impact factor: 4.345

6.  QSAR with experimental and predictive distributions: an information theoretic approach for assessing model quality.

Authors:  David J Wood; Lars Carlsson; Martin Eklund; Ulf Norinder; Jonna Stålring
Journal:  J Comput Aided Mol Des       Date:  2013-03-16       Impact factor: 3.686

7.  3D pharmacophoric similarity improves multi adverse drug event identification in pharmacovigilance.

Authors:  Santiago Vilar; Nicholas P Tatonetti; George Hripcsak
Journal:  Sci Rep       Date:  2015-03-06       Impact factor: 4.379

8.  A Fully Integrated Assay Panel for Early Drug Metabolism and Pharmacokinetics Profiling.

Authors:  Johan Wernevik; Fredrik Bergström; Anna Novén; Johan Hulthe; Linda Fredlund; Dan Addison; Jan Holmgren; Per-Erik Strömstedt; Erika Rehnström; Thomas Lundböck
Journal:  Assay Drug Dev Technol       Date:  2020-05-14       Impact factor: 1.738

9.  Synthesis, in silico study (DFT, ADMET) and crystal structure of novel sulfamoyloxy-oxazolidinones: Interaction with SARS-CoV-2.

Authors:  Abdeslem Bouzina; Malika Berredjem; Sofiane Bouacida; Khaldoun Bachari; Christelle Marminon; Marc Le Borgne; Zouhair Bouaziz; Yousra Ouafa Bouone
Journal:  J Mol Struct       Date:  2022-02-05       Impact factor: 3.841

10.  Molecular Docking Analysis of Selected Clinacanthus nutans Constituents as Xanthine Oxidase, Nitric Oxide Synthase, Human Neutrophil Elastase, Matrix Metalloproteinase 2, Matrix Metalloproteinase 9 and Squalene Synthase Inhibitors.

Authors:  Radhakrishnan Narayanaswamy; Azizul Isha; Lam Kok Wai; Intan Safinar Ismail
Journal:  Pharmacogn Mag       Date:  2016-01       Impact factor: 1.085

  10 in total

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