Literature DB >> 16861272

k-Space image correlation spectroscopy: a method for accurate transport measurements independent of fluorophore photophysics.

David L Kolin1, David Ronis, Paul W Wiseman.   

Abstract

We present the theory and application of reciprocal space image correlation spectroscopy (kICS). This technique measures the number density, diffusion coefficient, and velocity of fluorescently labeled macromolecules in a cell membrane imaged on a confocal, two-photon, or total internal reflection fluorescence microscope. In contrast to r-space correlation techniques, we show kICS can recover accurate dynamics even in the presence of complex fluorophore photobleaching and/or "blinking". Furthermore, these quantities can be calculated without nonlinear curve fitting, or any knowledge of the beam radius of the exciting laser. The number densities calculated by kICS are less sensitive to spatial inhomogeneity of the fluorophore distribution than densities measured using image correlation spectroscopy. We use simulations as a proof-of-principle to show that number densities and transport coefficients can be extracted using this technique. We present calibration measurements with fluorescent microspheres imaged on a confocal microscope, which recover Stokes-Einstein diffusion coefficients, and flow velocities that agree with single particle tracking measurements. We also show the application of kICS to measurements of the transport dynamics of alpha5-integrin/enhanced green fluorescent protein constructs in a transfected CHO cell imaged on a total internal reflection fluorescence microscope using charge-coupled device area detection.

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Year:  2006        PMID: 16861272      PMCID: PMC1578478          DOI: 10.1529/biophysj.106.082768

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  24 in total

1.  The standard deviation in fluorescence correlation spectroscopy.

Authors:  T Wohland; R Rigler; H Vogel
Journal:  Biophys J       Date:  2001-06       Impact factor: 4.033

2.  Spatial mapping of integrin interactions and dynamics during cell migration by image correlation microscopy.

Authors:  Paul W Wiseman; Claire M Brown; Donna J Webb; Benedict Hebert; Natalie L Johnson; Jeff A Squier; Mark H Ellisman; A F Horwitz
Journal:  J Cell Sci       Date:  2004-10-12       Impact factor: 5.285

3.  Spatiotemporal image correlation spectroscopy (STICS) theory, verification, and application to protein velocity mapping in living CHO cells.

Authors:  Benedict Hebert; Santiago Costantino; Paul W Wiseman
Journal:  Biophys J       Date:  2005-02-18       Impact factor: 4.033

Review 4.  Fluorescence microscopy.

Authors:  Jeff W Lichtman; José-Angel Conchello
Journal:  Nat Methods       Date:  2005-12       Impact factor: 28.547

Review 5.  The green fluorescent protein.

Authors:  R Y Tsien
Journal:  Annu Rev Biochem       Date:  1998       Impact factor: 23.643

6.  Quantum dot bioconjugates for ultrasensitive nonisotopic detection.

Authors:  W C Chan; S Nie
Journal:  Science       Date:  1998-09-25       Impact factor: 47.728

7.  Image correlation spectroscopy. II. Optimization for ultrasensitive detection of preexisting platelet-derived growth factor-beta receptor oligomers on intact cells.

Authors:  P W Wiseman; N O Petersen
Journal:  Biophys J       Date:  1999-02       Impact factor: 4.033

Review 8.  Single-particle tracking: applications to membrane dynamics.

Authors:  M J Saxton; K Jacobson
Journal:  Annu Rev Biophys Biomol Struct       Date:  1997

9.  Quantitation of membrane receptor distributions by image correlation spectroscopy: concept and application.

Authors:  N O Petersen; P L Höddelius; P W Wiseman; O Seger; K E Magnusson
Journal:  Biophys J       Date:  1993-09       Impact factor: 4.033

10.  Blinking and nonradiant dark fraction of water-soluble quantum dots in aqueous solution.

Authors:  Jie Yao; Daniel R Larson; Harshad D Vishwasrao; Warren R Zipfel; Watt W Webb
Journal:  Proc Natl Acad Sci U S A       Date:  2005-09-16       Impact factor: 11.205

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  45 in total

1.  Quantum dot fluorescence characterizes the nanoscale organization of T cell receptors for antigen.

Authors:  Sarah Boyle; David L Kolin; Joan Glick Bieler; Jonathan P Schneck; Paul W Wiseman; Michael Edidin
Journal:  Biophys J       Date:  2011-12-07       Impact factor: 4.033

Review 2.  Fluorescence-based transient state monitoring for biomolecular spectroscopy and imaging.

Authors:  Jerker Widengren
Journal:  J R Soc Interface       Date:  2010-04-07       Impact factor: 4.118

3.  An Intermittent Model for Intracellular Motions of Gold Nanostars by k-Space Scattering Image Correlation.

Authors:  Margaux Bouzin; Laura Sironi; Giuseppe Chirico; Laura D'Alfonso; Donato Inverso; Piersandro Pallavicini; Maddalena Collini
Journal:  Biophys J       Date:  2015-12-01       Impact factor: 4.033

4.  Get your kICS by measuring membrane protein dynamics.

Authors:  Andrew H A Clayton; Amitabha Chattopadhyay
Journal:  Biophys J       Date:  2015-07-07       Impact factor: 4.033

5.  Detection and correction of blinking bias in image correlation transport measurements of quantum dot tagged macromolecules.

Authors:  Nela Durisic; Alexia I Bachir; David L Kolin; Benedict Hebert; B Christoffer Lagerholm; Peter Grutter; Paul W Wiseman
Journal:  Biophys J       Date:  2007-05-25       Impact factor: 4.033

6.  Dynamical evolution of spatiotemporal patterns in mammalian middle cortex.

Authors:  Steven J Schiff; Xiaoying Huang; Jian-Young Wu
Journal:  Phys Rev Lett       Date:  2007-04-25       Impact factor: 9.161

7.  Continuous fluorescence microphotolysis and correlation spectroscopy using 4Pi microscopy.

Authors:  Anton Arkhipov; Jana Hüve; Martin Kahms; Reiner Peters; Klaus Schulten
Journal:  Biophys J       Date:  2007-08-17       Impact factor: 4.033

8.  Probing synaptic signaling with quantum dots.

Authors:  Paul De Koninck; Simon Labrecque; Colin D Heyes; Paul W Wiseman
Journal:  HFSP J       Date:  2007-05-02

Review 9.  Fluorescence correlation spectroscopy: past, present, future.

Authors:  Elliot L Elson
Journal:  Biophys J       Date:  2011-12-20       Impact factor: 4.033

10.  Paxillin dynamics measured during adhesion assembly and disassembly by correlation spectroscopy.

Authors:  Michelle A Digman; Claire M Brown; Alan R Horwitz; William W Mantulin; Enrico Gratton
Journal:  Biophys J       Date:  2007-11-09       Impact factor: 4.033

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