Literature DB >> 16855300

Advanced beamline automation for biological crystallography experiments.

Carl Cork1, James O'Neill, John Taylor, Thomas Earnest.   

Abstract

An automated crystal-mounting/alignment system has been developed at Lawrence Berkeley National Laboratory and has been installed on three of the protein-crystallography experimental stations at the Advanced Light Source (ALS); it is currently being implemented at synchrotron crystallography beamlines at CHESS, NSLS and the APS. The benefits to using an automounter system include (i) optimization of the use of synchrotron beam time, (ii) facilitation of advanced data-collection techniques, (iii) collection of higher quality data, (iv) reduction of the risk to crystals and (v) exploration of systematic studies of experimental protocols. Developments on the next-generation automounter with improvements in robustness, automated alignment and sample tracking are under way, with an end-to-end data-flow process being developed to allow remote data collection and monitoring.

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Year:  2006        PMID: 16855300     DOI: 10.1107/S0907444906014120

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  9 in total

1.  To automate or not to automate: this is the question.

Authors:  M Cymborowski; M Klimecka; M Chruszcz; M D Zimmerman; I A Shumilin; D Borek; K Lazarski; A Joachimiak; Z Otwinowski; W Anderson; W Minor
Journal:  J Struct Funct Genomics       Date:  2010-06-06

2.  Structure of the Archaeoglobus fulgidus orphan ORF AF1382 determined by sulfur SAD from a moderately diffracting crystal.

Authors:  Jin-Yi Zhu; Zheng-Qing Fu; Lirong Chen; Hao Xu; John Chrzas; John Rose; Bi-Cheng Wang
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2012-08-18

3.  Robotic sample changers for macromolecular X-ray crystallography and biological small-angle X-ray scattering at the National Synchrotron Light Source II.

Authors:  Edwin O Lazo; Stephen Antonelli; Jun Aishima; Herbert J Bernstein; Dileep Bhogadi; Martin R Fuchs; Nicolas Guichard; Sean McSweeney; Stuart Myers; Kun Qian; Dieter Schneider; Grace Shea-McCarthy; John Skinner; Robert Sweet; Lin Yang; Jean Jakoncic
Journal:  J Synchrotron Radiat       Date:  2021-08-23       Impact factor: 2.557

Review 4.  Practical macromolecular cryocrystallography.

Authors:  J W Pflugrath
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2015-05-27       Impact factor: 1.056

5.  Facilitating best practices in collecting anomalous scattering data for de novo structure solution at the ESRF Structural Biology Beamlines.

Authors:  Daniele de Sanctis; Marcus Oscarsson; Alexander Popov; Olof Svensson; Gordon Leonard
Journal:  Acta Crystallogr D Struct Biol       Date:  2016-03-01       Impact factor: 7.652

6.  High-density grids for efficient data collection from multiple crystals.

Authors:  Elizabeth L Baxter; Laura Aguila; Roberto Alonso-Mori; Christopher O Barnes; Christopher A Bonagura; Winnie Brehmer; Axel T Brunger; Guillermo Calero; Tom T Caradoc-Davies; Ruchira Chatterjee; William F Degrado; James S Fraser; Mohamed Ibrahim; Jan Kern; Brian K Kobilka; Andrew C Kruse; Karl M Larsson; Heinrik T Lemke; Artem Y Lyubimov; Aashish Manglik; Scott E McPhillips; Erik Norgren; Siew S Pang; S M Soltis; Jinhu Song; Jessica Thomaston; Yingssu Tsai; William I Weis; Rahel A Woldeyes; Vittal Yachandra; Junko Yano; Athina Zouni; Aina E Cohen
Journal:  Acta Crystallogr D Struct Biol       Date:  2016-01-01       Impact factor: 7.652

7.  Development of SPACE-II for rapid sample exchange at SPring-8 macromolecular crystallography beamlines.

Authors:  Hironori Murakami; Kazuya Hasegawa; Go Ueno; Naoto Yagi; Masaki Yamamoto; Takashi Kumasaka
Journal:  Acta Crystallogr D Struct Biol       Date:  2020-01-31       Impact factor: 7.652

8.  Implementation and performance of SIBYLS: a dual endstation small-angle X-ray scattering and macromolecular crystallography beamline at the Advanced Light Source.

Authors:  Scott Classen; Greg L Hura; James M Holton; Robert P Rambo; Ivan Rodic; Patrick J McGuire; Kevin Dyer; Michal Hammel; George Meigs; Kenneth A Frankel; John A Tainer
Journal:  J Appl Crystallogr       Date:  2013-01-17       Impact factor: 3.304

9.  Hitting the target: fragment screening with acoustic in situ co-crystallization of proteins plus fragment libraries on pin-mounted data-collection micromeshes.

Authors:  Xingyu Yin; Alexander Scalia; Ludmila Leroy; Christina M Cuttitta; Gina M Polizzo; Daniel L Ericson; Christian G Roessler; Olven Campos; Millie Y Ma; Rakhi Agarwal; Rick Jackimowicz; Marc Allaire; Allen M Orville; Robert M Sweet; Alexei S Soares
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2014-04-30
  9 in total

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