Literature DB >> 16853853

Time-resolved spectroscopic studies of B12 coenzymes: comparison of the influence of solvent on the primary photolysis mechanism and geminate recombination of methyl-, ethyl-, n-propyl-, and 5'-deoxyadenosylcobalamin.

Roseanne J Sension1, D Ahmasi Harris, Allwyn G Cole.   

Abstract

A transient absorption study of the photolysis of methylcobalamin (MeCbl), ethylcobalamin (EtCbl), and n-propylcobalamin (PrCbl) in ethylene glycol spanning six decades in time, from 10 fs to 10 ns, is reported. These measurements probe the influence of solvent on the formation and decay of the metal-to-ligand charge transfer (MLCT) intermediate observed following excitation of MeCbl, the photolysis mechanism in EtCbl and PrCbl, and the rate constants for geminate recombination of the alkyl radicals with cob(II)alamin and for the escape of the alkyl radicals from the initial solvent cage. Earlier investigations probed the dynamics of 5'-dexoyadenosylcobalamin (coenzyme B(12)) in water and ethylene glycol (Yoder, L. M.; Cole, A. G.; Walker, L. A., II; Sension, R. J. J. Phys. Chem. B 2001, 105, 12180-12188) and alkylcobalamins in water (Cole, A. G.; Yoder, L. M.; Shiang, J. J.; Anderson, N. A.; Walker, L. A., II; Banaszak Holl, M. M.; Sension, R. J. J. Am. Chem. Soc. 2002, 124, 434-441). The results of these investigations are discussed in the context of the literature on the frictional influence of solvent on chemical reaction dynamics. The measurements allow a separation of the influence of the solvent on the intrinsic rate constant for geminate recombination and the rate constant for escape from the initial solvent cage. The rate constant for the intrinsic geminate recombination of cob(II)alamin with the alkyl radical is weakly dependent on the solvent and on the nature of the alkyl radical (Me, Et, Pr, or Ado). The Et, Pr, and Ado radicals exhibit the behavior expected for diffusion-controlled escape from the initial solvent cage. In contrast, the magnitude of cage escape for the Me radical is much larger than anticipated on the basis of hydrodynamic arguments.

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Year:  2005        PMID: 16853853     DOI: 10.1021/jp053202w

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  7 in total

1.  Characterization of protein contributions to cobalt-carbon bond cleavage catalysis in adenosylcobalamin-dependent ethanolamine ammonia-lyase by using photolysis in the ternary complex.

Authors:  Wesley D Robertson; Miao Wang; Kurt Warncke
Journal:  J Am Chem Soc       Date:  2011-04-14       Impact factor: 15.419

2.  Cage escape competes with geminate recombination during alkane hydroxylation by the diiron oxygenase AlkB.

Authors:  Rachel N Austin; Kate Luddy; Karla Erickson; Marilla Pender-Cudlip; Erin Bertrand; Dayi Deng; Ryan S Buzdygon; Jan B van Beilen; John T Groves
Journal:  Angew Chem Int Ed Engl       Date:  2008       Impact factor: 15.336

3.  B12-dependent photoresponsive protein hydrogels for controlled stem cell/protein release.

Authors:  Ri Wang; Zhongguang Yang; Jiren Luo; I-Ming Hsing; Fei Sun
Journal:  Proc Natl Acad Sci U S A       Date:  2017-05-22       Impact factor: 11.205

4.  Photolysis of adenosylcobalamin and radical pair recombination in ethanolamine ammonia-lyase probed on the micro- to millisecond time scale by using time-resolved optical absorption spectroscopy.

Authors:  Wesley D Robertson; Kurt Warncke
Journal:  Biochemistry       Date:  2009-01-13       Impact factor: 3.162

5.  Fluorophore Assisted Photolysis of Thiolato-Cob(III)alamins.

Authors:  Zachary L Rodgers; Thomas A Shell; Alexander M Brugh; Hannah L Nowotarski; Malcolm D E Forbes; David S Lawrence
Journal:  Inorg Chem       Date:  2016-02-05       Impact factor: 5.165

6.  Computational study of the DPAP molecular rotor in various environments: from force field development to molecular dynamics simulations and spectroscopic calculations.

Authors:  Marina Macchiagodena; Gianluca Del Frate; Giuseppe Brancato; Balasubramanian Chandramouli; Giordano Mancini; Vincenzo Barone
Journal:  Phys Chem Chem Phys       Date:  2017-11-22       Impact factor: 3.676

7.  TD-DFT insight into photodissociation of the Co-C bond in coenzyme B12.

Authors:  Hui Liu; Karina Kornobis; Piotr Lodowski; Maria Jaworska; Pawel M Kozlowski
Journal:  Front Chem       Date:  2014-02-05       Impact factor: 5.221

  7 in total

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