Literature DB >> 16853391

Nonadiabatic proton-coupled electron transfer reactions: impact of donor-acceptor vibrations, reorganization energies, and couplings on dynamics and rates.

Elizabeth Hatcher1, Alexander Soudackov, Sharon Hammes-Schiffer.   

Abstract

Fundamental aspects of proton-coupled electron transfer (PCET) reactions in solution are analyzed with molecular dynamics simulations for a series of model systems. The analysis addresses the impact of the solvent reorganization energy, the proton donor-acceptor mode vibrational frequency, and the distance dependence of the nonadiabatic coupling on the dynamics of the reaction and the magnitude of the rate. The rate for nonadiabatic PCET is expressed in terms of a time-dependent probability flux correlation function. The time dependence of the probability flux correlation function is determined mainly by the solvent reorganization energy and is not significantly influenced by the proton donor-acceptor frequency or the distance dependence of the nonadiabatic coupling. The magnitude of the PCET rate becomes greater as the solvent reorganization energy decreases, the proton donor-acceptor frequency decreases, and the distance dependence of the nonadiabatic coupling increases. The approximations underlying a previously derived analytical PCET rate expression are also investigated. The short-time approximation for the solvent is valid for these types of systems. In addition, solvent damping effects on the proton donor-acceptor motion are not significant on the time scale of the probability flux. The rates calculated from the molecular dynamics simulations agree well with those calculated from the analytical rate expression.

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Year:  2005        PMID: 16853391     DOI: 10.1021/jp052909f

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  7 in total

Review 1.  Biochemistry and theory of proton-coupled electron transfer.

Authors:  Agostino Migliore; Nicholas F Polizzi; Michael J Therien; David N Beratan
Journal:  Chem Rev       Date:  2014-04-01       Impact factor: 60.622

2.  Theoretical Studies of Proton-Coupled Electron Transfer: Models and Concepts Relevant to Bioenergetics.

Authors:  Sharon Hammes-Schiffer; Elizabeth Hatcher; Hiroshi Ishikita; Jonathan H Skone; Alexander V Soudackov
Journal:  Coord Chem Rev       Date:  2008-02-01       Impact factor: 22.315

Review 3.  Hydrogen tunneling in enzymes and biomimetic models.

Authors:  Joshua P Layfield; Sharon Hammes-Schiffer
Journal:  Chem Rev       Date:  2013-12-20       Impact factor: 60.622

4.  Slow hydrogen atom transfer reactions of oxo- and hydroxo-vanadium compounds: the importance of intrinsic barriers.

Authors:  Christopher R Waidmann; Xin Zhou; Erin A Tsai; Werner Kaminsky; David A Hrovat; Weston Thatcher Borden; James M Mayer
Journal:  J Am Chem Soc       Date:  2009-04-08       Impact factor: 15.419

5.  Toward a chemical mechanism of proton pumping by the B-type cytochrome c oxidases: application of density functional theory to cytochrome ba3 of Thermus thermophilus.

Authors:  James A Fee; David A Case; Louis Noodleman
Journal:  J Am Chem Soc       Date:  2008-10-17       Impact factor: 15.419

6.  Separating Proton and Electron Transfer Effects in Three-Component Concerted Proton-Coupled Electron Transfer Reactions.

Authors:  Wesley D Morris; James M Mayer
Journal:  J Am Chem Soc       Date:  2017-07-21       Impact factor: 15.419

7.  Rate-Driving Force Relationships in the Multisite Proton-Coupled Electron Transfer Activation of Ketones.

Authors:  Guanqi Qiu; Robert R Knowles
Journal:  J Am Chem Soc       Date:  2019-02-01       Impact factor: 15.419

  7 in total

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