Literature DB >> 16853151

Ultrafast hydration dynamics in melittin folding and aggregation: helix formation and tetramer self-assembly.

Weihong Qiu1, Luyuan Zhang, Ya-Ting Kao, Wenyun Lu, Tanping Li, Jongjoo Kim, Gregory M Sollenberger, Lijuan Wang, Dongping Zhong.   

Abstract

Melittin, an amphipathic peptide from honeybee venom, consists of 26 amino acid residues and adopts different conformations from a random coil, to an alpha-helix, and to a self-assembled tetramer under certain aqueous environments. We report here our systematic studies of the hydration dynamics in these conformations using single intrinsic tryptophan (W19) as a molecular probe. With femtosecond resolution, we observed the solvation dynamics occurring in 0.62 and 14.7 ps in a random-coiled primary structure. The former represents bulklike water motion, and the latter reflects surface-type hydration dynamics of proteins. As a comparison, a model tripeptide (KWK) was also studied. At a membrane-water interface, melittin folds into a secondary alpha-helical structure, and the interfacial water motion was found to take as long as 114 ps, indicating a well-ordered water structure along the membrane surface. In high-salt aqueous solution, the dielectric screening and ionic solvation promote the hydrophobic core collapse in melittin aggregation and facilitate the tetramer formation. This self-assembled tertiary structure is also stabilized by the strong hydrophilic interactions of charged C-terminal residues and associated ions with water molecules in the two assembled regions. The hydration dynamics was observed to occur in 87 ps, significantly slower than typical water relaxation at protein surfaces but similar to water motion at membrane interfaces. Thus, the observed time scale of approximately 100 ps probably implies appropriate water mobility for mediating the formation of high-order structures of melittin in an alpha-helix and a self-assembled tetramer. These results elucidate the critical role of hydration dynamics in peptide conformational transitions and protein structural stability and integrity.

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Year:  2005        PMID: 16853151     DOI: 10.1021/jp0511754

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  19 in total

1.  NMR studies on the monomer-tetramer transition of melittin in an aqueous solution at high and low temperatures.

Authors:  Yoshinori Miura
Journal:  Eur Biophys J       Date:  2012-06-28       Impact factor: 1.733

Review 2.  Dynamics and mechanisms of DNA repair by photolyase.

Authors:  Zheyun Liu; Lijuan Wang; Dongping Zhong
Journal:  Phys Chem Chem Phys       Date:  2015-05-14       Impact factor: 3.676

3.  Dissection of complex protein dynamics in human thioredoxin.

Authors:  Weihong Qiu; Lijuan Wang; Wenyun Lu; Amanda Boechler; David A R Sanders; Dongping Zhong
Journal:  Proc Natl Acad Sci U S A       Date:  2007-03-16       Impact factor: 11.205

4.  Mapping hydration dynamics around a protein surface.

Authors:  Luyuan Zhang; Lijuan Wang; Ya-Ting Kao; Weihong Qiu; Yi Yang; Oghaghare Okobiah; Dongping Zhong
Journal:  Proc Natl Acad Sci U S A       Date:  2007-11-14       Impact factor: 11.205

5.  Solvation in protein (un)folding of melittin tetramer-monomer transition.

Authors:  Christina M Othon; Oh-Hoon Kwon; Milo M Lin; Ahmed H Zewail
Journal:  Proc Natl Acad Sci U S A       Date:  2009-07-21       Impact factor: 11.205

6.  Hydrated and dehydrated tertiary interactions--opening and closing--of a four-helix bundle peptide.

Authors:  Martin Lignell; Lotta T Tegler; Hans-Christian Becker
Journal:  Biophys J       Date:  2009-07-22       Impact factor: 4.033

7.  Ultrafast solvation dynamics at binding and active sites of photolyases.

Authors:  Chih-Wei Chang; Lijun Guo; Ya-Ting Kao; Jiang Li; Chuang Tan; Tanping Li; Chaitanya Saxena; Zheyun Liu; Lijuan Wang; Aziz Sancar; Dongping Zhong
Journal:  Proc Natl Acad Sci U S A       Date:  2010-01-26       Impact factor: 11.205

8.  Effects of Peptide Charge, Orientation, and Concentration on Melittin Transmembrane Pores.

Authors:  Almudena Pino-Angeles; Themis Lazaridis
Journal:  Biophys J       Date:  2018-06-19       Impact factor: 4.033

9.  Retention of Native Quaternary Structure in Racemic Melittin Crystals.

Authors:  Kathleen W Kurgan; Adam F Kleman; Craig A Bingman; Dale F Kreitler; Bernard Weisblum; Katrina T Forest; Samuel H Gellman
Journal:  J Am Chem Soc       Date:  2019-05-06       Impact factor: 15.419

10.  Validation of response function construction and probing heterogeneous protein hydration by intrinsic tryptophan.

Authors:  Yangzhong Qin; Chih-Wei Chang; Lijuan Wang; Dongping Zhong
Journal:  J Phys Chem B       Date:  2012-11-02       Impact factor: 2.991

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