Literature DB >> 16850514

Effect of beta-O-glucosylation on L-Ser and L-Thr diamides: a bias toward alpha-helical conformations.

Francisco Corzana1, Jesús H Busto, Søren B Engelsen, Jesús Jiménez-Barbero, Juan L Asensio, Jesús M Peregrina, A Avenoza.   

Abstract

Beta-D-O-glucosylation produces a remarkable effect on the peptide backbone of the model peptides derived from serine and threonine. Consequently, this type of glycosylation is responsible for the experimentally observed shift from extended conformations (model peptides) towards the folded conformations (model glycopeptides). The conclusion has been solidly assessed by a combined NMR/MD protocol. Interestingly, the MD (molecular dynamics) results for the glycopeptides point towards the existence of water-bridging molecules between the sugar and peptide moieties, which could explain the stabilization of the folded conformers in aqueous solution.

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Year:  2006        PMID: 16850514     DOI: 10.1002/chem.200600128

Source DB:  PubMed          Journal:  Chemistry        ISSN: 0947-6539            Impact factor:   5.236


  9 in total

1.  CHARMM additive all-atom force field for carbohydrate derivatives and its utility in polysaccharide and carbohydrate-protein modeling.

Authors:  Olgun Guvench; Sairam S Mallajosyula; E Prabhu Raman; Elizabeth Hatcher; Kenno Vanommeslaeghe; Theresa J Foster; Francis W Jamison; Alexander D Mackerell
Journal:  J Chem Theory Comput       Date:  2011-10-11       Impact factor: 6.006

Review 2.  Physicochemical properties of cells and their effects on intrinsically disordered proteins (IDPs).

Authors:  Francois-Xavier Theillet; Andres Binolfi; Tamara Frembgen-Kesner; Karan Hingorani; Mohona Sarkar; Ciara Kyne; Conggang Li; Peter B Crowley; Lila Gierasch; Gary J Pielak; Adrian H Elcock; Anne Gershenson; Philipp Selenko
Journal:  Chem Rev       Date:  2014-06-05       Impact factor: 60.622

3.  Effect of hydroxylysine-O-glycosylation on the structure of type I collagen molecule: A computational study.

Authors:  Ming Tang; Xiaocong Wang; Neha S Gandhi; Bethany Lachele Foley; Kevin Burrage; Robert J Woods; YuanTong Gu
Journal:  Glycobiology       Date:  2020-09-28       Impact factor: 4.313

4.  Conformational determinants of the activity of antiproliferative factor glycopeptide.

Authors:  Sairam S Mallajosyula; Kristie M Adams; Joseph J Barchi; Alexander D MacKerell
Journal:  J Chem Inf Model       Date:  2013-05-15       Impact factor: 4.956

5.  Influence of solvent and intramolecular hydrogen bonding on the conformational properties of o-linked glycopeptides.

Authors:  Sairam S Mallajosyula; Alexander D MacKerell
Journal:  J Phys Chem B       Date:  2011-08-31       Impact factor: 2.991

6.  Cell signaling, post-translational protein modifications and NMR spectroscopy.

Authors:  Francois-Xavier Theillet; Caroline Smet-Nocca; Stamatios Liokatis; Rossukon Thongwichian; Jonas Kosten; Mi-Kyung Yoon; Richard W Kriwacki; Isabelle Landrieu; Guy Lippens; Philipp Selenko
Journal:  J Biomol NMR       Date:  2012-09-26       Impact factor: 2.835

Review 7.  Characterizing Post-Translational Modifications and Their Effects on Protein Conformation Using NMR Spectroscopy.

Authors:  Ajith Kumar; Vaishali Narayanan; Ashok Sekhar
Journal:  Biochemistry       Date:  2019-11-04       Impact factor: 3.162

8.  Mucin architecture behind the immune response: design, evaluation and conformational analysis of an antitumor vaccine derived from an unnatural MUC1 fragment.

Authors:  Nuria Martínez-Sáez; Nitin T Supekar; Margreet A Wolfert; Iris A Bermejo; Ramón Hurtado-Guerrero; Juan L Asensio; Jesús Jiménez-Barbero; Jesús H Busto; Alberto Avenoza; Geert-Jan Boons; Jesús M Peregrina; Francisco Corzana
Journal:  Chem Sci       Date:  2015-12-15       Impact factor: 9.825

9.  Enhanced Permeability and Binding Activity of Isobutylene-Grafted Peptides.

Authors:  Shuang Sun; Ismael Compañón; Nuria Martínez-Sáez; João D Seixas; Omar Boutureira; Francisco Corzana; Gonçalo J L Bernardes
Journal:  Chembiochem       Date:  2017-11-22       Impact factor: 3.164

  9 in total

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