Literature DB >> 16846390

Analytical integrate-and-fire neuron models with conductance-based dynamics for event-driven simulation strategies.

Michelle Rudolph1, Alain Destexhe.   

Abstract

Event-driven simulation strategies were proposed recently to simulate integrate-and-fire (IF) type neuronal models. These strategies can lead to computationally efficient algorithms for simulating large-scale networks of neurons; most important, such approaches are more precise than traditional clock-driven numerical integration approaches because the timing of spikes is treated exactly. The drawback of such event-driven methods is that in order to be efficient, the membrane equations must be solvable analytically, or at least provide simple analytic approximations for the state variables describing the system. This requirement prevents, in general, the use of conductance-based synaptic interactions within the framework of event-driven simulations and, thus, the investigation of network paradigms where synaptic conductances are important. We propose here a number of extensions of the classical leaky IF neuron model involving approximations of the membrane equation with conductance-based synaptic current, which lead to simple analytic expressions for the membrane state, and therefore can be used in the event-driven framework. These conductance-based IF (gIF) models are compared to commonly used models, such as the leaky IF model or biophysical models in which conductances are explicitly integrated. All models are compared with respect to various spiking response properties in the presence of synaptic activity, such as the spontaneous discharge statistics, the temporal precision in resolving synaptic inputs, and gain modulation under in vivo-like synaptic bombardment. Being based on the passive membrane equation with fixed-threshold spike generation, the proposed gIF models are situated in between leaky IF and biophysical models but are much closer to the latter with respect to their dynamic behavior and response characteristics, while still being nearly as computationally efficient as simple IF neuron models. gIF models should therefore provide a useful tool for efficient and precise simulation of large-scale neuronal networks with realistic, conductance-based synaptic interactions.

Mesh:

Year:  2006        PMID: 16846390     DOI: 10.1162/neco.2006.18.9.2146

Source DB:  PubMed          Journal:  Neural Comput        ISSN: 0899-7667            Impact factor:   2.026


  12 in total

1.  A discrete time neural network model with spiking neurons: II: dynamics with noise.

Authors:  B Cessac
Journal:  J Math Biol       Date:  2010-07-24       Impact factor: 2.259

2.  A discrete time neural network model with spiking neurons. Rigorous results on the spontaneous dynamics.

Authors:  B Cessac
Journal:  J Math Biol       Date:  2007-09-14       Impact factor: 2.259

Review 3.  Simulation of networks of spiking neurons: a review of tools and strategies.

Authors:  Romain Brette; Michelle Rudolph; Ted Carnevale; Michael Hines; David Beeman; James M Bower; Markus Diesmann; Abigail Morrison; Philip H Goodman; Frederick C Harris; Milind Zirpe; Thomas Natschläger; Dejan Pecevski; Bard Ermentrout; Mikael Djurfeldt; Anders Lansner; Olivier Rochel; Thierry Vieville; Eilif Muller; Andrew P Davison; Sami El Boustani; Alain Destexhe
Journal:  J Comput Neurosci       Date:  2007-07-12       Impact factor: 1.621

4.  Voltage-stepping schemes for the simulation of spiking neural networks.

Authors:  G Zheng; A Tonnelier; D Martinez
Journal:  J Comput Neurosci       Date:  2008-11-26       Impact factor: 1.621

5.  A Markovian event-based framework for stochastic spiking neural networks.

Authors:  Jonathan D Touboul; Olivier D Faugeras
Journal:  J Comput Neurosci       Date:  2011-04-16       Impact factor: 1.621

6.  Low-dimensional, morphologically accurate models of subthreshold membrane potential.

Authors:  Anthony R Kellems; Derrick Roos; Nan Xiao; Steven J Cox
Journal:  J Comput Neurosci       Date:  2009-01-27       Impact factor: 1.621

Review 7.  Computer modelling of epilepsy.

Authors:  William W Lytton
Journal:  Nat Rev Neurosci       Date:  2008-07-02       Impact factor: 34.870

8.  Statistics of spike trains in conductance-based neural networks: Rigorous results.

Authors:  Bruno Cessac
Journal:  J Math Neurosci       Date:  2011-08-25       Impact factor: 1.300

9.  On dynamics of integrate-and-fire neural networks with conductance based synapses.

Authors:  Bruno Cessac; Thierry Viéville
Journal:  Front Comput Neurosci       Date:  2008-07-04       Impact factor: 2.380

10.  NEVESIM: event-driven neural simulation framework with a Python interface.

Authors:  Dejan Pecevski; David Kappel; Zeno Jonke
Journal:  Front Neuroinform       Date:  2014-08-14       Impact factor: 4.081

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