Literature DB >> 16840813

Role of strong intramolecular N-H...N hydrogen bonds in determining the conformation of adenosine-receptor antagonists.

Valeria Ferretti1, Loretta Pretto, Mojgan Aghazadeh Tabrizi, Paola Gilli.   

Abstract

Over the last few years many efforts have been devoted to the discovery of new adenosine antagonists which can selectively bind to one of the four adenosine receptors, called A(1), A(2A), A(2B) and A(3), in order to develop new drugs with few side effects. The present paper reports the crystal structures of four newly synthesized antagonists belonging to the chemical class of pyrazolo-triazolo-pyrimidine derivatives, which display good affinity and selectivity properties towards the A(2A) or A(3) receptor subtypes. These molecules assume an overall planar conformation due to the formation of strong intramolecular N-H...N hydrogen bonds. A systematic investigation on molecules containing the ureidic -NH-C(=O,S)-NH-C=N- fragment has shown that the formation of such interactions is a common feature for this class of compounds. The associated energy, evaluated through DFT calculations, is some 50.24 kJ mol(-1), leading to the conclusion that the hydrogen bond, and consequently the planar conformation, is retained not only in the solid state but also in solution during the interaction of the molecule with its receptor.

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Year:  2006        PMID: 16840813     DOI: 10.1107/S0108768106013966

Source DB:  PubMed          Journal:  Acta Crystallogr B        ISSN: 0108-7681


  3 in total

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Authors:  Kevin E Riley; Bryan T Op't Holt; Kenneth M Merz
Journal:  J Chem Theory Comput       Date:  2007       Impact factor: 6.006

2.  A computational study of intramolecular hydrogen bonds breaking/formation: impact on the structural flexibility of the ranitidine molecule.

Authors:  Mariana Kozlowska; Jakub Goclon; Pawel Rodziewicz
Journal:  J Mol Model       Date:  2015-03-21       Impact factor: 1.810

3.  8-Methyl-2-[4-(trifluoro-meth-yl)phen-yl]-8H-pyrazolo-[4,3-e][1,2,4]triazolo[1,5-c]pyrimidin-5-amine methanol disolvate.

Authors:  Anton V Dolzhenko; Geok Kheng Tan; Anna V Dolzhenko; Lip Lin Koh; Giorgia Pastorin
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-06-26
  3 in total

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