Literature DB >> 1683397

DNA polymorphisms in new isolates of 'Deinococcus radiopugnans'.

C I Masters1, R G Murray, B E Moseley, K W Minton.   

Abstract

Nineteen new Deinococcus isolates from soil, 18 of which were from samples immediately adjacent to a lake in Nottingham, UK, were characterized by conventional criteria, and found to be identical to each other and to conform most closely to the species D. radiopugnans. However, we detected three different restriction enzyme activities in three different isolates. Because of this suggestion of heterogeneity, we examined the isolates for restriction fragment length polymorphisms (RFLPs). RFLP analysis of the 19 original isolates, using three different probes, distinguished 17 divergent groups. This extraordinary diversity cannot be attributed to geographical differences, nor to the method of isolation, which employed UV-radiation selection.

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Year:  1991        PMID: 1683397     DOI: 10.1099/00221287-137-7-1459

Source DB:  PubMed          Journal:  J Gen Microbiol        ISSN: 0022-1287


  11 in total

1.  Purification, crystallization and preliminary X-ray crystallographic analysis of branched-chain aminotransferase from Deinococcus radiodurans.

Authors:  Chung-Der Chen; Tien-Feng Huang; Chih-Hao Lin; Hong-Hsiang Guan; Yin-Cheng Hsieh; Yi-Hung Lin; Yen-Chieh Huang; Ming-Yih Liu; Wen-Chang Chang; Chun-Jung Chen
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2007-05-05

2.  Genetic Variation within a Lotic Population of Janthinobacterium lividum.

Authors:  J L Saeger; A B Hale
Journal:  Appl Environ Microbiol       Date:  1993-07       Impact factor: 4.792

3.  Dynamics of Deinococcus radiodurans under controlled growth conditions.

Authors:  Sidhartha S Jena; Hiren M Joshi; K P V Sabareesh; B V R Tata; T S Rao
Journal:  Biophys J       Date:  2006-07-07       Impact factor: 4.033

4.  Genome sequence of the radioresistant bacterium Deinococcus radiodurans R1.

Authors:  O White; J A Eisen; J F Heidelberg; E K Hickey; J D Peterson; R J Dodson; D H Haft; M L Gwinn; W C Nelson; D L Richardson; K S Moffat; H Qin; L Jiang; W Pamphile; M Crosby; M Shen; J J Vamathevan; P Lam; L McDonald; T Utterback; C Zalewski; K S Makarova; L Aravind; M J Daly; K W Minton; R D Fleischmann; K A Ketchum; K E Nelson; S Salzberg; H O Smith; J C Venter; C M Fraser
Journal:  Science       Date:  1999-11-19       Impact factor: 47.728

5.  Synonymous codon usage bias dependent on local nucleotide context in the class Deinococci.

Authors:  Robert W Cutler; Panuwan Chantawannakul
Journal:  J Mol Evol       Date:  2008-08-12       Impact factor: 2.395

6.  Crystal structures of complexes of the branched-chain aminotransferase from Deinococcus radiodurans with α-ketoisocaproate and L-glutamate suggest the radiation resistance of this enzyme for catalysis.

Authors:  Chung-De Chen; Chih-Hao Lin; Phimonphan Chuankhayan; Yen-Chieh Huang; Yin-Cheng Hsieh; Tien-Feng Huang; Hong-Hsiang Guan; Ming-Yih Liu; Wen-Chang Chang; Chun-Jung Chen
Journal:  J Bacteriol       Date:  2012-09-14       Impact factor: 3.490

7.  Fatty acids are precursors of alkylamines in Deinococcus radiodurans.

Authors:  R Anderson; Y Huang
Journal:  J Bacteriol       Date:  1992-11       Impact factor: 3.490

8.  Distinctive protein signatures provide molecular markers and evidence for the monophyletic nature of the deinococcus-thermus phylum.

Authors:  Emma Griffiths; Radhey S Gupta
Journal:  J Bacteriol       Date:  2004-05       Impact factor: 3.490

9.  Characterization of chromosomal DNA profiles from Helicobacter pylori strains isolated from sequential gastric biopsy specimens.

Authors:  S M Salama; Q Jiang; N Chang; R W Sherbaniuk; D E Taylor
Journal:  J Clin Microbiol       Date:  1995-09       Impact factor: 5.948

10.  High-quality genome sequence of the radioresistant bacterium Deinococcus ficus KS 0460.

Authors:  Vera Y Matrosova; Elena K Gaidamakova; Kira S Makarova; Olga Grichenko; Polina Klimenkova; Robert P Volpe; Rok Tkavc; Gözen Ertem; Isabel H Conze; Evelyne Brambilla; Marcel Huntemann; Alicia Clum; Manoj Pillay; Krishnaveni Palaniappan; Neha Varghese; Natalia Mikhailova; Dimitrios Stamatis; Tbk Reddy; Chris Daum; Nicole Shapiro; Natalia Ivanova; Nikos Kyrpides; Tanja Woyke; Hajnalka Daligault; Karen Davenport; Tracy Erkkila; Lynne A Goodwin; Wei Gu; Christine Munk; Hazuki Teshima; Yan Xu; Patrick Chain; Michael Woolbert; Nina Gunde-Cimerman; Yuri I Wolf; Tine Grebenc; Cene Gostinčar; Michael J Daly
Journal:  Stand Genomic Sci       Date:  2017-07-28
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