Literature DB >> 16833763

How short can the H...H intermolecular contact be? New findings that reveal the covalent nature of extremely strong interactions.

Sławomir J Grabowski1, W Andrzej Sokalski, Jerzy Leszczynski.   

Abstract

Ab initio calculations at the MP2/6-311++G(d,p) and MP2/aug-cc-pVDZ//MP2/aug-cc-pVTZ levels have been performed for the following complexes: H2OH+...HBeH, H2OH+...HBeBeH, H2OH+...HBeF, HClOH+...HBeH, Cl2OH+...HBeH, and Cl2OH+...HBeF. For all dimers considered, extremely short H...H intermolecular contacts (1.0-1.3 A) were obtained. These are the shortest intermolecular distances which have ever been reported, with binding energies within the range of 13.7-24.3 kcal/mol (MP2/aug-cc-pVDZ//MP2/aug-cc-pVTZ level). The interaction energies of the complexes analyzed were also extrapolated to the complete basis set (CBS) limit. To explain the nature of such strong interactions, the Bader theory was applied, and the characteristics of the bond critical points (BCPs) were analyzed. It was pointed out that for the major part of the H...H contacts considered here the Laplacian of the electron density at H...H BCP is negative indicating the partly covalent nature of such a connection. The term "covalent character of the hydrogen bond" used sometimes in recent studies is discussed. An analysis of the interaction energy components for dihydrogen bonded systems considered indicates that in contrast to conventional hydrogen bonded systems the attractive electrostatic term is outweighed by the repulsive exchange energy term and that the higher order delocalization energy term is the most important attractive term.

Entities:  

Mesh:

Substances:

Year:  2005        PMID: 16833763     DOI: 10.1021/jp0444215

Source DB:  PubMed          Journal:  J Phys Chem A        ISSN: 1089-5639            Impact factor:   2.781


  12 in total

1.  Theoretical and experimental studies of the isomeric protonation in solution for a prototype aliphatic ring containing two nitrogens.

Authors:  Peter I Nagy; Aditya Maheshwari; Yong-Wah Kim; William S Messer
Journal:  J Phys Chem B       Date:  2010-01-14       Impact factor: 2.991

Review 2.  Energy decomposition analysis based on a block-localized wavefunction and multistate density functional theory.

Authors:  Yirong Mo; Peng Bao; Jiali Gao
Journal:  Phys Chem Chem Phys       Date:  2011-03-02       Impact factor: 3.676

3.  Supramolecular synthon pattern in solid clioquinol and cloxiquine (APIs of antibacterial, antifungal, antiaging and antituberculosis drugs) studied by ³⁵Cl NQR, ¹H-¹⁷O and ¹H-¹⁴N NQDR and DFT/QTAIM.

Authors:  Jolanta Natalia Latosińska; Magdalena Latosińska; Marzena Agnieszka Tomczak; Janez Seliger; Veselko Zagar
Journal:  J Mol Model       Date:  2010-11-16       Impact factor: 1.810

4.  DPT tautomerization of the long A∙A Watson-Crick base pair formed by the amino and imino tautomers of adenine: combined QM and QTAIM investigation.

Authors:  Ol'ha O Brovarets'; Roman O Zhurakivsky; Dmytro M Hovorun
Journal:  J Mol Model       Date:  2013-05-29       Impact factor: 1.810

5.  Functional role of Asp160 and the deprotonation mechanism of ammonium in the Escherichia coli ammonia channel protein AmtB.

Authors:  Yuchun Lin; Zexing Cao; Yirong Mo
Journal:  J Phys Chem B       Date:  2009-04-09       Impact factor: 2.991

6.  Harnessing redox activity for the formation of uranium tris(imido) compounds.

Authors:  Nickolas H Anderson; Samuel O Odoh; Yiyi Yao; Ursula J Williams; Brian A Schaefer; John J Kiernicki; Andrew J Lewis; Mitchell D Goshert; Phillip E Fanwick; Eric J Schelter; Justin R Walensky; Laura Gagliardi; Suzanne C Bart
Journal:  Nat Chem       Date:  2014-07-27       Impact factor: 24.427

7.  Intrinsic dynamic and static nature of each HB in the multi-HBs between nucleobase pairs and its behavior, elucidated with QTAIM dual functional analysis and QC calculations.

Authors:  Waro Nakanishi; Satoko Hayashi; Taro Nishide
Journal:  RSC Adv       Date:  2020-07-01       Impact factor: 3.361

8.  Physical nature of intermolecular interactions inside Sir2 homolog active site: molecular dynamics and ab initio study.

Authors:  Przemysław Czeleń; Żaneta Czyżnikowska
Journal:  J Mol Model       Date:  2016-05-06       Impact factor: 1.810

9.  Intrinsic Dynamic Nature of Neutral Hydrogen Bonds Elucidated with QTAIM Dual Functional Analysis: Role of the Compliance Force Constants and QTAIM-DFA Parameters in Stability.

Authors:  Taro Nishide; Satoko Hayashi; Waro Nakanishi
Journal:  ChemistryOpen       Date:  2018-06-06       Impact factor: 2.911

10.  Formation of β-cyclodextrin complexes in an anhydrous environment.

Authors:  Hocine Sifaoui; Ali Modarressi; Pierre Magri; Anna Stachowicz-Kuśnierz; Jacek Korchowiec; Marek Rogalski
Journal:  J Mol Model       Date:  2016-08-12       Impact factor: 1.810

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.