Literature DB >> 16829958

Nucleotide-dependent conformational changes in the DnaA-like core of the origin recognition complex.

Megan G Clarey1, Jan P Erzberger, Patricia Grob, Andres E Leschziner, James M Berger, Eva Nogales, Michael Botchan.   

Abstract

Structural details of initiator proteins for DNA replication have provided clues to the molecular events in this process. EM reconstructions of the Drosophila melanogaster origin recognition complex (ORC) reveal nucleotide-dependent conformational changes in the core of the complex. All five AAA+ domains in ORC contain a conserved structural element that, in DnaA, promotes formation of a right-handed helix, indicating that helical AAA+ substructures may be a feature of all initiators. A DnaA helical pentamer can be docked into ORC, and the location of Orc5 uniquely positions this core. The results suggest that ATP-dependent conformational changes observed in ORC derive from reorientation of the AAA+ domains. By analogy to the DNA-wrapping activity of DnaA, we posit that ORC together with Cdc6 prepares origin DNA for helicase loading through mechanisms related to the established pathway of prokaryotes.

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Year:  2006        PMID: 16829958     DOI: 10.1038/nsmb1121

Source DB:  PubMed          Journal:  Nat Struct Mol Biol        ISSN: 1545-9985            Impact factor:   15.369


  52 in total

1.  Multiple Cdt1 molecules act at each origin to load replication-competent Mcm2-7 helicases.

Authors:  Thomas J Takara; Stephen P Bell
Journal:  EMBO J       Date:  2011-11-01       Impact factor: 11.598

2.  Soj/ParA stalls DNA replication by inhibiting helix formation of the initiator protein DnaA.

Authors:  Graham Scholefield; Jeff Errington; Heath Murray
Journal:  EMBO J       Date:  2012-01-27       Impact factor: 11.598

3.  Origin remodeling and opening in bacteria rely on distinct assembly states of the DnaA initiator.

Authors:  Karl E Duderstadt; Melissa L Mott; Nancy J Crisona; Kevin Chuang; Haw Yang; James M Berger
Journal:  J Biol Chem       Date:  2010-07-01       Impact factor: 5.157

Review 4.  Eukaryotic DNA replication origins: many choices for appropriate answers.

Authors:  Marcel Méchali
Journal:  Nat Rev Mol Cell Biol       Date:  2010-10       Impact factor: 94.444

5.  Cdc6 ATPase activity regulates ORC x Cdc6 stability and the selection of specific DNA sequences as origins of DNA replication.

Authors:  Christian Speck; Bruce Stillman
Journal:  J Biol Chem       Date:  2007-02-21       Impact factor: 5.157

6.  Cryo-electron microscopy reveals a novel DNA-binding site on the MCM helicase.

Authors:  Alessandro Costa; Gijs van Duinen; Barbara Medagli; James Chong; Nozomi Sakakibara; Zvi Kelman; Satish K Nair; Ardan Patwardhan; Silvia Onesti
Journal:  EMBO J       Date:  2008-07-24       Impact factor: 11.598

7.  Localized melting of duplex DNA by Cdc6/Orc1 at the DNA replication origin in the hyperthermophilic archaeon Pyrococcus furiosus.

Authors:  Fujihiko Matsunaga; Kie Takemura; Masaki Akita; Akinori Adachi; Takeshi Yamagami; Yoshizumi Ishino
Journal:  Extremophiles       Date:  2009-09-30       Impact factor: 2.395

Review 8.  The Mcm complex: unwinding the mechanism of a replicative helicase.

Authors:  Matthew L Bochman; Anthony Schwacha
Journal:  Microbiol Mol Biol Rev       Date:  2009-12       Impact factor: 11.056

9.  A double-hexameric MCM2-7 complex is loaded onto origin DNA during licensing of eukaryotic DNA replication.

Authors:  Cecile Evrin; Pippa Clarke; Juergen Zech; Rudi Lurz; Jingchuan Sun; Stefan Uhle; Huilin Li; Bruce Stillman; Christian Speck
Journal:  Proc Natl Acad Sci U S A       Date:  2009-11-12       Impact factor: 11.205

10.  In vivo DNA binding of bacteriophage GA-1 protein p6.

Authors:  Martín Alcorlo; Margarita Salas; José M Hermoso
Journal:  J Bacteriol       Date:  2007-09-14       Impact factor: 3.490

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