Literature DB >> 1682931

Modelling neutral and selective evolution of protein folding.

D J Lipman1, W J Wilbur.   

Abstract

We examine a model evolutionary space consisting of genotypes mapped to their corresponding phenotypes. This mapping is derived from a lattice model for proteins which, despite its highly idealized nature, has been shown to share general properties with real proteins. Large evolutionary networks are observed, with genotypes corresponding to non-lethal phenotypes linked by unit mutational steps. Neutral mutations are necessary for traversing the evolutionary networks, and even one neutral mutation in a genotype can change the phenotypes attainable by a unit mutational step.

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Year:  1991        PMID: 1682931     DOI: 10.1098/rspb.1991.0081

Source DB:  PubMed          Journal:  Proc Biol Sci        ISSN: 0962-8452            Impact factor:   5.349


  57 in total

1.  Modeling evolutionary landscapes: mutational stability, topology, and superfunnels in sequence space.

Authors:  E Bornberg-Bauer; H S Chan
Journal:  Proc Natl Acad Sci U S A       Date:  1999-09-14       Impact factor: 11.205

2.  Recombinatoric exploration of novel folded structures: a heteropolymer-based model of protein evolutionary landscapes.

Authors:  Yan Cui; Wing Hung Wong; Erich Bornberg-Bauer; Hue Sun Chan
Journal:  Proc Natl Acad Sci U S A       Date:  2002-01-22       Impact factor: 11.205

Review 3.  The role of robustness in phenotypic adaptation and innovation.

Authors:  Andreas Wagner
Journal:  Proc Biol Sci       Date:  2012-01-04       Impact factor: 5.349

4.  A comparison of genotype-phenotype maps for RNA and proteins.

Authors:  Evandro Ferrada; Andreas Wagner
Journal:  Biophys J       Date:  2012-04-18       Impact factor: 4.033

5.  The evolvability of programmable hardware.

Authors:  Karthik Raman; Andreas Wagner
Journal:  J R Soc Interface       Date:  2010-06-09       Impact factor: 4.118

6.  Evolvability and single-genotype fluctuation in phenotypic properties: a simple heteropolymer model.

Authors:  Tao Chen; David Vernazobres; Tetsuya Yomo; Erich Bornberg-Bauer; Hue Sun Chan
Journal:  Biophys J       Date:  2010-06-02       Impact factor: 4.033

7.  Comparing folding codes in simple heteropolymer models of protein evolutionary landscape: robustness of the superfunnel paradigm.

Authors:  Richard Wroe; Erich Bornberg-Bauer; Hue Sun Chan
Journal:  Biophys J       Date:  2004-10-22       Impact factor: 4.033

8.  Circuit topology and the evolution of robustness in two-gene circadian oscillators.

Authors:  Andreas Wagner
Journal:  Proc Natl Acad Sci U S A       Date:  2005-08-08       Impact factor: 11.205

9.  Innovation and robustness in complex regulatory gene networks.

Authors:  S Ciliberti; O C Martin; A Wagner
Journal:  Proc Natl Acad Sci U S A       Date:  2007-08-09       Impact factor: 11.205

10.  Local and nonlocal interactions in globular proteins and mechanisms of alcohol denaturation.

Authors:  P D Thomas; K A Dill
Journal:  Protein Sci       Date:  1993-12       Impact factor: 6.725

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