Literature DB >> 16825643

Flavobacterium daejeonense sp. nov. and Flavobacterium suncheonense sp. nov., isolated from greenhouse soils in Korea.

Byung-Yong Kim1, Hang-Yeon Weon2, Sylvie Cousin3, Seung-Hee Yoo1, Soon-Wo Kwon1, Seung-Joo Go1, Erko Stackebrandt3.   

Abstract

Two yellow-pigmented, Gram-negative, rod-shaped bacterial strains, GH1-10(T) and GH29-5(T), were isolated from greenhouse soils in Korea. 16S rRNA gene sequence analysis indicated that these strains were related to members of the genus Flavobacterium. Strain GH1-10(T) was most closely related to Flavobacterium psychrolimnae and Flavobacterium denitrificans, with sequence similarities of 95.9 and 95.2 %, respectively. Strain GH29-5(T) was most closely related to "Flavobacterium saliodium", F. denitrificans and Flavobacterium frigoris, with sequence similarities of 94.3, 92.5 and 92.5 %, respectively. The major cellular fatty acids of GH1-10(T) were iso-C(15 : 0), summed feature 3 (iso-C(15 : 0) 2-OH and/or C(16 : 1)omega7c) and iso-C(17 : 0) 3-OH, and those of GH29-5(T) were iso-C(15 : 0), iso-C(17 : 0) 3-OH, iso-C(15 : 1) G and iso-C(15 : 0) 3-OH. Both strains contained menaquinone with six isoprene units (MK-6) as the sole quinone. The DNA G+C contents of GH1-10(T) and GH29-5(T) were 35 and 39 mol%, respectively. Based on the phylogenetic and phenotypic data presented, it is concluded that the two bacteria represent two separate novel species of the genus Flavobacterium. The names proposed to accommodate these organisms are Flavobacterium daejeonense sp. nov., with type strain GH1-10(T) (=KACC 11422(T)=DSM 17708(T)), and Flavobacterium suncheonense sp. nov., with type strain GH29-5(T) (=KACC 11423(T)=DSM 17707(T)).

Entities:  

Mesh:

Substances:

Year:  2006        PMID: 16825643     DOI: 10.1099/ijs.0.64243-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  13 in total

1.  Anaerobic ferrous oxidation by heterotrophic denitrifying enriched culture.

Authors:  Ru Wang; Ping Zheng; Ya-Juan Xing; Meng Zhang; Abbas Ghulam; Zhi-Qing Zhao; Wei Li; Lan Wang
Journal:  J Ind Microbiol Biotechnol       Date:  2014-03-12       Impact factor: 3.346

2.  Flavobacterium chungangensis sp. nov., a Bacterium Isolated from Soil of Chinese Cabbage Garden.

Authors:  Md Amdadul Huq; Shahina Akter; Sun-Young Lee
Journal:  Curr Microbiol       Date:  2018-02-20       Impact factor: 2.188

3.  Profiling of virulence associated genes of Pasteurella multocida isolated from cattle.

Authors:  Subhash Verma; Mandeep Sharma; Shailja Katoch; Lovit Verma; Sandeep Kumar; Vishal Dogra; Rajesh Chahota; Prasenjit Dhar; Geetanjali Singh
Journal:  Vet Res Commun       Date:  2012-09-25       Impact factor: 2.459

4.  Rhizosphere microbiome structure alters to enable wilt resistance in tomato.

Authors:  Min-Jung Kwak; Hyun Gi Kong; Kihyuck Choi; Soon-Kyeong Kwon; Ju Yeon Song; Jidam Lee; Pyeong An Lee; Soo Yeon Choi; Minseok Seo; Hyoung Ju Lee; Eun Joo Jung; Hyein Park; Nazish Roy; Heebal Kim; Myeong Min Lee; Edward M Rubin; Seon-Woo Lee; Jihyun F Kim
Journal:  Nat Biotechnol       Date:  2018-10-08       Impact factor: 54.908

5.  Environmental and gut bacteroidetes: the food connection.

Authors:  François Thomas; Jan-Hendrik Hehemann; Etienne Rebuffet; Mirjam Czjzek; Gurvan Michel
Journal:  Front Microbiol       Date:  2011-05-30       Impact factor: 5.640

6.  Non-contiguous finished genome sequence and description of the gliding bacterium Flavobacterium seoulense sp. nov.

Authors:  Su-Kyoung Shin; Heemoon Goo; Yong-Joon Cho; Soonsung Kwon; Dongeun Yong; Hana Yi
Journal:  Stand Genomic Sci       Date:  2014-12-29

7.  Reclassification of the taxonomic status of SEMIA3007 isolated in Mexico B-11A Mex as Rhizobium leguminosarum bv. viceae by bioinformatic tools.

Authors:  Luciano Takeshi Kishi; Camila Cesário Fernandes; Wellington Pine Omori; João Carlos Campanharo; Eliana Gertrudes de Macedo Lemos
Journal:  BMC Microbiol       Date:  2016-11-04       Impact factor: 3.605

8.  High-quality draft genome sequence of Flavobacterium suncheonense GH29-5(T) (DSM 17707(T)) isolated from greenhouse soil in South Korea, and emended description of Flavobacterium suncheonense GH29-5(T).

Authors:  Nisreen Tashkandy; Sari Sabban; Mohammad Fakieh; Jan P Meier-Kolthoff; Sixing Huang; Brian J Tindall; Manfred Rohde; Mohammed N Baeshen; Nabih A Baeshen; Alla Lapidus; Alex Copeland; Manoj Pillay; T B K Reddy; Marcel Huntemann; Amrita Pati; Natalia Ivanova; Victor Markowitz; Tanja Woyke; Markus Göker; Hans-Peter Klenk; Nikos C Kyrpides; Richard L Hahnke
Journal:  Stand Genomic Sci       Date:  2016-06-16

9.  High quality draft genomic sequence of Flavobacterium enshiense DK69(T) and comparison among Flavobacterium genomes.

Authors:  Zhipeng Zeng; Chong Chen; Hailun Du; Gejiao Wang; Mingshun Li
Journal:  Stand Genomic Sci       Date:  2015-11-10

10.  Development of Culture Medium for the Isolation of Flavobacterium and Chryseobacterium from Rhizosphere Soil.

Authors:  Tomoki Nishioka; Mohsen Mohamed Elsharkawy; Haruhisa Suga; Koji Kageyama; Mitsuro Hyakumachi; Masafumi Shimizu
Journal:  Microbes Environ       Date:  2016-04-20       Impact factor: 2.912

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.