Literature DB >> 29464361

Flavobacterium chungangensis sp. nov., a Bacterium Isolated from Soil of Chinese Cabbage Garden.

Md Amdadul Huq1, Shahina Akter2, Sun-Young Lee3.   

Abstract

A novel bacterial strain MAH-10T was isolated from soil sample of a Chinese cabbage garden, Republic of Korea and was characterized using a polyphasic approach. Cells were Gram-staining negative, rod-shaped, yellowish orange colored, and motile. The strain was aerobic, catalase and oxidase are positive, and optimum growth temperature and pH were 28 °C and 6.5, respectively. Flexirubin-type pigments were found to be present. On the basis of 16S rRNA gene sequence analysis, strain MAH-10T belongs to the genus Flavobacterium and is most closely related to Flavobacterium tyrosinilyticum KCTC 42726T (98.7%). On the basis of phylogenetic tree, other closely related species are Flavobacterium banpakuense KACC 14225T (98.3%) and Flavobacterium chungbukense KACC 15048T (97.6%). In DNA-DNA hybridization tests, the DNA relatedness between strain MAH-10T and its closest phylogenetic neighbor was below 45.0%. The DNA G+C content was 37.2 mol% and the predominant respiratory quinone was menaquinone-6. The major cellular fatty acids were C15:0 iso, C16:0, and summed feature 3 (C16:1ω7c and/or C16:1ω6c). On the basis of DNA-DNA hybridization results and genotypic, chemotaxonomic, and physiological data analysis, it is demonstrated that strain MAH-10T represented a novel species within the genus Flavobacterium, for which the name Flavobacterium chungangensis is proposed. The type strain is MAH-10T (=KACC 19296T=CGMCC 1.16226T). The NCBI GenBank accession number for the 16S rRNA gene sequence of strain MAH-10T is KY964277 and the digital protologue database (DPD) Taxon Number of strain MAH-10T is TA00296.

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Year:  2018        PMID: 29464361     DOI: 10.1007/s00284-018-1456-6

Source DB:  PubMed          Journal:  Curr Microbiol        ISSN: 0343-8651            Impact factor:   2.188


  28 in total

1.  Flavobacterium chungbukense sp. nov., isolated from soil.

Authors:  Chae-Sung Lim; Yong-Sik Oh; Jae-Kwan Lee; A-Rum Park; Jae-Soo Yoo; Sung-Keun Rhee; Dong-Hyun Roh
Journal:  Int J Syst Evol Microbiol       Date:  2010-12-24       Impact factor: 2.747

2.  Flavobacterium soli sp. nov., isolated from soil.

Authors:  Jung-Hoon Yoon; So-Jung Kang; Tae-Kwang Oh
Journal:  Int J Syst Evol Microbiol       Date:  2006-05       Impact factor: 2.747

3.  MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods.

Authors:  Koichiro Tamura; Daniel Peterson; Nicholas Peterson; Glen Stecher; Masatoshi Nei; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2011-05-04       Impact factor: 16.240

4.  Flavobacterium croceum sp. nov., isolated from activated sludge.

Authors:  Minjeong Park; Shipeng Lu; Seung Hyun Ryu; Bok Sil Chung; Woojun Park; Chang-Jin Kim; Che Ok Jeon
Journal:  Int J Syst Evol Microbiol       Date:  2006-10       Impact factor: 2.747

5.  Flavobacterium vireti sp. nov., isolated from soil.

Authors:  Hina Singh; Juan Du; KyungHwa Won; Jung-Eun Yang; Shahina Akter; Ki-Young Kim; Tae-Hoo Yi
Journal:  Antonie Van Leeuwenhoek       Date:  2015-03-29       Impact factor: 2.271

6.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

7.  Flavobacterium enshiense sp. nov., isolated from soil, and emended descriptions of the genus Flavobacterium and Flavobacterium cauense, Flavobacterium saliperosum and Flavobacterium suncheonense.

Authors:  Kun Dong; Fang Chen; Yan Du; Gejiao Wang
Journal:  Int J Syst Evol Microbiol       Date:  2012-05-25       Impact factor: 2.747

8.  Flavobacterium aciduliphilum sp. nov., isolated from freshwater, and emended description of the genus Flavobacterium.

Authors:  Ji Young Kang; Jeesun Chun; Kwang Yeop Jahng
Journal:  Int J Syst Evol Microbiol       Date:  2012-08-17       Impact factor: 2.747

9.  Flavobacterium tyrosinilyticum sp. nov., isolated from the rhizosphere of wild strawberry.

Authors:  Juan Du; Tae-Hoo Yi
Journal:  Int J Syst Evol Microbiol       Date:  2016-04-20       Impact factor: 2.747

10.  Flavobacterium caeni sp. nov., isolated from a sequencing batch reactor for the treatment of malachite green effluents.

Authors:  Ying Liu; Jing-Hua Jin; Yu-Guang Zhou; Hong-Can Liu; Zhi-Pei Liu
Journal:  Int J Syst Evol Microbiol       Date:  2009-08-03       Impact factor: 2.747

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