Literature DB >> 16823612

A procedure for image enhancement in chromosome painting.

W Rens1, K Moderegger, H Skelton, O Clarke, V Trifonov, M A Ferguson-Smith.   

Abstract

An image enhancement procedure was developed to produce high-contrast chromosome paint images. This procedure is well suited for images where brightness-contrast enhancement is subjective. Three examples are given to show that the procedure is very efficient to remove non-specific hybridization signals from the chromosome paint image. Chromosomes of roe deer contain large amounts of centromeric heterochromatic DNA. Echidna chromosomes show specific heterochromatic DNA distributed over several chromosomes. In both cases chromosome identification was hampered by bright heterochromatic regions. The enhancement tool was fully used in cross-species chromosome painting, which is the last example. The three examples show that the procedure is very simple to use and removes background in a controlled and defined manner.

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Year:  2006        PMID: 16823612     DOI: 10.1007/s10577-006-1056-3

Source DB:  PubMed          Journal:  Chromosome Res        ISSN: 0967-3849            Impact factor:   5.239


  3 in total

1.  Karyotype relationships between four distantly related marsupials revealed by reciprocal chromosome painting.

Authors:  W Rens; P C O'Brien; F Yang; J A Graves; M A Ferguson-Smith
Journal:  Chromosome Res       Date:  1999       Impact factor: 5.239

2.  Dynamics of mammalian chromosome evolution inferred from multispecies comparative maps.

Authors:  William J Murphy; Denis M Larkin; Annelie Everts-van der Wind; Guillaume Bourque; Glenn Tesler; Loretta Auvil; Jonathan E Beever; Bhanu P Chowdhary; Francis Galibert; Lisa Gatzke; Christophe Hitte; Stacey N Meyers; Denis Milan; Elaine A Ostrander; Greg Pape; Heidi G Parker; Terje Raudsepp; Margarita B Rogatcheva; Lawrence B Schook; Loren C Skow; Michael Welge; James E Womack; Stephen J O'brien; Pavel A Pevzner; Harris A Lewin
Journal:  Science       Date:  2005-07-22       Impact factor: 47.728

3.  Resolution and evolution of the duck-billed platypus karyotype with an X1Y1X2Y2X3Y3X4Y4X5Y5 male sex chromosome constitution.

Authors:  Willem Rens; Frank Grützner; Patricia C M O'brien; Helen Fairclough; Jennifer A M Graves; Malcolm A Ferguson-Smith
Journal:  Proc Natl Acad Sci U S A       Date:  2004-11-08       Impact factor: 11.205

  3 in total
  3 in total

1.  Cross-species bacterial artificial chromosome-fluorescence in situ hybridization painting of the tomato and potato chromosome 6 reveals undescribed chromosomal rearrangements.

Authors:  Xiaomin Tang; Dóra Szinay; Chunting Lang; Munikote S Ramanna; Edwin A G van der Vossen; Erwin Datema; René Klein Lankhorst; Jan de Boer; Sander A Peters; Christian Bachem; Willem Stiekema; Richard G F Visser; Hans de Jong; Yuling Bai
Journal:  Genetics       Date:  2008-09-14       Impact factor: 4.562

2.  Comparative analysis of sex chromosomes in Leporinus species (Teleostei, Characiformes) using chromosome painting.

Authors:  Patrícia Pasquali Parise-Maltempi; Edson Lourenço da Silva; Willem Rens; Frances Dearden; Patricia C M O'Brien; Vladimir Trifonov; Malcolm A Ferguson-Smith
Journal:  BMC Genet       Date:  2013-07-03       Impact factor: 2.797

3.  The multiple sex chromosomes of platypus and echidna are not completely identical and several share homology with the avian Z.

Authors:  Willem Rens; Patricia C M O'Brien; Frank Grützner; Oliver Clarke; Daria Graphodatskaya; Enkhjargal Tsend-Ayush; Vladimir A Trifonov; Helen Skelton; Mary C Wallis; Steve Johnston; Frederic Veyrunes; Jennifer A M Graves; Malcolm A Ferguson-Smith
Journal:  Genome Biol       Date:  2007       Impact factor: 13.583

  3 in total

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