Literature DB >> 16821138

ATP-dependent chromatin remodeling complexes in Drosophila.

Karim Bouazoune1, Alexander Brehm.   

Abstract

The regulation of chromatin structure is of fundamental importance for many DNA-based processes in eukaryotes. Activation or repression of gene transcription or DNA replication depends on enzymes which can generate the appropriate chromatin environment. Several of these enzymes utilize the energy of ATP hydrolysis to alter nucleosome structure. In recent years our understanding of the multisubunit complexes within which they function, their mechanisms of action, their regulation and their in-vivo roles has increased. Much of what we have learned has been gleaned from studies in Drosophila melanogaster. Here we will review what we know about the main classes of ATP-dependent chromatin remodelers in Drosophila.

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Year:  2006        PMID: 16821138     DOI: 10.1007/s10577-006-1067-0

Source DB:  PubMed          Journal:  Chromosome Res        ISSN: 0967-3849            Impact factor:   5.239


  144 in total

1.  CHD1 interacts with SSRP1 and depends on both its chromodomain and its ATPase/helicase-like domain for proper association with chromatin.

Authors:  D E Kelley; D G Stokes; R P Perry
Journal:  Chromosoma       Date:  1999-04       Impact factor: 4.316

2.  Enhancer-promoter communication mediated by Chip during Pannier-driven proneural patterning is regulated by Osa.

Authors:  Pascal Heitzler; Luc Vanolst; Inna Biryukova; Philippe Ramain
Journal:  Genes Dev       Date:  2003-03-01       Impact factor: 11.361

3.  Structural analysis of the yeast SWI/SNF chromatin remodeling complex.

Authors:  Corey L Smith; Rachel Horowitz-Scherer; Joan F Flanagan; Christopher L Woodcock; Craig L Peterson
Journal:  Nat Struct Biol       Date:  2003-02

4.  Native E2F/RBF complexes contain Myb-interacting proteins and repress transcription of developmentally controlled E2F target genes.

Authors:  Michael Korenjak; Barbie Taylor-Harding; Ulrich K Binné; John S Satterlee; Olivier Stevaux; Rein Aasland; Helen White-Cooper; Nick Dyson; Alexander Brehm
Journal:  Cell       Date:  2004-10-15       Impact factor: 41.582

5.  MTA3 and the Mi-2/NuRD complex regulate cell fate during B lymphocyte differentiation.

Authors:  Naoyuki Fujita; David L Jaye; Cissy Geigerman; Adil Akyildiz; Myesha R Mooney; Jeremy M Boss; Paul A Wade
Journal:  Cell       Date:  2004-10-01       Impact factor: 41.582

6.  The dermatomyositis-specific autoantigen Mi2 is a component of a complex containing histone deacetylase and nucleosome remodeling activities.

Authors:  Y Zhang; G LeRoy; H P Seelig; W S Lane; D Reinberg
Journal:  Cell       Date:  1998-10-16       Impact factor: 41.582

7.  Five SWI genes are required for expression of the HO gene in yeast.

Authors:  M Stern; R Jensen; I Herskowitz
Journal:  J Mol Biol       Date:  1984-10-05       Impact factor: 5.469

8.  Nucleosomal DNA regulates the core-histone-binding subunit of the human Hat1 acetyltransferase.

Authors:  A Verreault; P D Kaufman; R Kobayashi; B Stillman
Journal:  Curr Biol       Date:  1998-01-15       Impact factor: 10.834

9.  XNP-1/ATR-X acts with RB, HP1 and the NuRD complex during larval development in C. elegans.

Authors:  Carlos Cardoso; Carole Couillault; Cecile Mignon-Ravix; Anne Millet; Jonathan J Ewbank; Michel Fontés; Nathalie Pujol
Journal:  Dev Biol       Date:  2005-02-01       Impact factor: 3.582

10.  Role of nucleosome remodeling factor NURF in transcriptional activation of chromatin.

Authors:  G Mizuguchi; T Tsukiyama; J Wisniewski; C Wu
Journal:  Mol Cell       Date:  1997-12       Impact factor: 17.970

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  43 in total

1.  Plant homeodomain (PHD) fingers of CHD4 are histone H3-binding modules with preference for unmodified H3K4 and methylated H3K9.

Authors:  Robyn E Mansfield; Catherine A Musselman; Ann H Kwan; Samuel S Oliver; Adam L Garske; Foteini Davrazou; John M Denu; Tatiana G Kutateladze; Joel P Mackay
Journal:  J Biol Chem       Date:  2011-01-28       Impact factor: 5.157

Review 2.  Trithorax group proteins: switching genes on and keeping them active.

Authors:  Bernd Schuettengruber; Anne-Marie Martinez; Nicola Iovino; Giacomo Cavalli
Journal:  Nat Rev Mol Cell Biol       Date:  2011-11-23       Impact factor: 94.444

3.  dCHD3, a novel ATP-dependent chromatin remodeler associated with sites of active transcription.

Authors:  Magdalena Murawska; Natascha Kunert; Joke van Vugt; Gernot Längst; Elisabeth Kremmer; Colin Logie; Alexander Brehm
Journal:  Mol Cell Biol       Date:  2008-02-04       Impact factor: 4.272

4.  Drosophila ISWI regulates the association of histone H1 with interphase chromosomes in vivo.

Authors:  Giorgia Siriaco; Renate Deuring; Mariacristina Chioda; Peter B Becker; John W Tamkun
Journal:  Genetics       Date:  2009-04-20       Impact factor: 4.562

5.  The Osa-containing SWI/SNF chromatin-remodeling complex regulates stem cell commitment in the adult Drosophila intestine.

Authors:  Xiankun Zeng; Xinhua Lin; Steven X Hou
Journal:  Development       Date:  2013-09       Impact factor: 6.868

6.  The Central Region of the Drosophila Co-repressor Groucho as a Regulatory Hub.

Authors:  Pak N Kwong; Michael Chambers; Ajay A Vashisht; Wiam Turki-Judeh; Tak Yu Yau; James A Wohlschlegel; Albert J Courey
Journal:  J Biol Chem       Date:  2015-10-19       Impact factor: 5.157

7.  Brahma regulates a specific trans-splicing event at the mod(mdg4) locus of Drosophila melanogaster.

Authors:  Simei Yu; Johan Waldholm; Stefanie Böhm; Neus Visa
Journal:  RNA Biol       Date:  2014-02-06       Impact factor: 4.652

8.  A novel Pzg-NURF complex regulates Notch target gene activity.

Authors:  Sabrina J Kugler; Anja C Nagel
Journal:  Mol Biol Cell       Date:  2010-08-04       Impact factor: 4.138

9.  CHD3 proteins and polycomb group proteins antagonistically determine cell identity in Arabidopsis.

Authors:  Ernst Aichinger; Corina B R Villar; Sara Farrona; José C Reyes; Lars Hennig; Claudia Köhler
Journal:  PLoS Genet       Date:  2009-08-14       Impact factor: 5.917

10.  X chromosomal regulation in flies: when less is more.

Authors:  Erinc Hallacli; Asifa Akhtar
Journal:  Chromosome Res       Date:  2009       Impact factor: 5.239

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