Literature DB >> 16815707

Decoding RNA motional codes.

Zahra Shajani1, Pritilekha Deka, Gabriele Varani.   

Abstract

When proteins and small molecules bind to RNA, they often alter its conformation. These structural changes are an essential aspect of the ability of RNA to sense signaling molecules and modulate gene expression. Thus far, few studies have been dedicated to understanding how RNA moves at a residue level and how these motions change upon complex formation. A recent report highlights how intrinsic motions in RNA correlate with its ability to bind to cognate ligands.

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Year:  2006        PMID: 16815707     DOI: 10.1016/j.tibs.2006.06.002

Source DB:  PubMed          Journal:  Trends Biochem Sci        ISSN: 0968-0004            Impact factor:   13.807


  7 in total

Review 1.  RNA dynamics: perspectives from spin labels.

Authors:  Phuong Nguyen; Peter Z Qin
Journal:  Wiley Interdiscip Rev RNA       Date:  2011-08-22       Impact factor: 9.957

2.  Theory of nonrigid rotational motion applied to NMR relaxation in RNA.

Authors:  Prashant S Emani; Gregory L Olsen; Gabriele Varani; Gary P Drobny
Journal:  J Phys Chem A       Date:  2011-10-17       Impact factor: 2.781

3.  Slow exchange model of nonrigid rotational motion in RNA for combined solid-state and solution NMR studies.

Authors:  Prashant S Emani; Gregory L Olsen; Dorothy C Echodu; Gabriele Varani; Gary P Drobny
Journal:  J Phys Chem B       Date:  2010-11-10       Impact factor: 2.991

4.  Interbase-FRET binding assay for pre-microRNAs.

Authors:  Mattias Bood; Anna Wypijewska Del Nogal; Jesper R Nilsson; Fredrik Edfeldt; Anders Dahlén; Malin Lemurell; L Marcus Wilhelmsson; Morten Grøtli
Journal:  Sci Rep       Date:  2021-04-30       Impact factor: 4.379

Review 5.  Evaluating RNA Structural Flexibility: Viruses Lead the Way.

Authors:  Connor W Fairman; Andrew M L Lever; Julia C Kenyon
Journal:  Viruses       Date:  2021-10-22       Impact factor: 5.048

6.  A common variant in the 3'UTR of the GRIK4 glutamate receptor gene affects transcript abundance and protects against bipolar disorder.

Authors:  B S Pickard; H M Knight; R S Hamilton; D C Soares; R Walker; J K F Boyd; J Machell; A Maclean; K A McGhee; A Condie; D J Porteous; D St Clair; I Davis; D H R Blackwood; W J Muir
Journal:  Proc Natl Acad Sci U S A       Date:  2008-09-29       Impact factor: 11.205

Review 7.  Target-Directed Approaches for Screening Small Molecules against RNA Targets.

Authors:  Hafeez S Haniff; Laurent Knerr; Jonathan L Chen; Matthew D Disney; Helen L Lightfoot
Journal:  SLAS Discov       Date:  2020-05-18       Impact factor: 3.341

  7 in total

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