Literature DB >> 16807232

Essential residues in the C terminus of the bacteriophage T7 gene 2.5 single-stranded DNA-binding protein.

Boriana Marintcheva1, Samir M Hamdan, Seung-Joo Lee, Charles C Richardson.   

Abstract

Gene 2.5 of bacteriophage T7 encodes a single-stranded DNA (ssDNA)-binding protein (gp2.5) that is an essential component of the phage replisome. Similar to other prokaryotic ssDNA-binding proteins, gp2.5 has an acidic C terminus that is involved in protein-protein interactions at the replication fork and in modulation of the ssDNA binding properties of the molecule. We have used genetic and biochemical approaches to identify residues critical for the function of the C terminus of gp2.5. The presence of an aromatic residue in the C-terminal position is essential for gp2.5 function. Deletion of the C-terminal residue, phenylalanine, is detrimental to its function, as is the substitution of this residue with non-aromatic amino acids. Placing the C-terminal phenylalanine in the penultimate position also results in loss of function. Moderate shortening of the length of the acidic portion of the C terminus is tolerated when the aromatic nature of the C-terminal residue is preserved. Gradual removal of the acidic C terminus of gp2.5 results in a higher affinity for ssDNA and a decreased ability to interact with T7 DNA polymerase/thioredoxin. The replacement of the charged residues in the C terminus with neutral amino acids abolishes gp2.5 function. Our data show that both the C-terminal aromatic residue and the overall acidic charge of the C terminus of gp2.5 are critical for its function.

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Year:  2006        PMID: 16807232     DOI: 10.1074/jbc.M604601200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  22 in total

1.  Two modes of interaction of the single-stranded DNA-binding protein of bacteriophage T7 with the DNA polymerase-thioredoxin complex.

Authors:  Sharmistha Ghosh; Samir M Hamdan; Charles C Richardson
Journal:  J Biol Chem       Date:  2010-04-06       Impact factor: 5.157

2.  Acidic C-terminal tail of the ssDNA-binding protein of bacteriophage T7 and ssDNA compete for the same binding surface.

Authors:  Boriana Marintcheva; Assen Marintchev; Gerhard Wagner; Charles C Richardson
Journal:  Proc Natl Acad Sci U S A       Date:  2008-01-31       Impact factor: 11.205

3.  Flap endonuclease activity of gene 6 exonuclease of bacteriophage T7.

Authors:  Hitoshi Mitsunobu; Bin Zhu; Seung-Joo Lee; Stanley Tabor; Charles C Richardson
Journal:  J Biol Chem       Date:  2014-01-06       Impact factor: 5.157

4.  C-terminal phenylalanine of bacteriophage T7 single-stranded DNA-binding protein is essential for strand displacement synthesis by T7 DNA polymerase at a nick in DNA.

Authors:  Sharmistha Ghosh; Boriana Marintcheva; Masateru Takahashi; Charles C Richardson
Journal:  J Biol Chem       Date:  2009-09-02       Impact factor: 5.157

5.  Two distinct SSB protein families in nucleo-cytoplasmic large DNA viruses.

Authors:  Darius Kazlauskas; Ceslovas Venclovas
Journal:  Bioinformatics       Date:  2012-10-24       Impact factor: 6.937

6.  Heterohexamer of 56- and 63-kDa Gene 4 Helicase-Primase of Bacteriophage T7 in DNA Replication.

Authors:  Huidong Zhang; Seung-Joo Lee; Arkadiusz W Kulczyk; Bin Zhu; Charles C Richardson
Journal:  J Biol Chem       Date:  2012-08-10       Impact factor: 5.157

7.  Characterization of the RstB2 protein, the DNA-binding protein of CTXϕ phage from Vibrio cholerae.

Authors:  Alina Falero; Karen Marrero; Sonia Trigueros; Rafael Fando
Journal:  Virus Genes       Date:  2014-03-19       Impact factor: 2.332

Review 8.  Mechanisms of mutagenesis: DNA replication in the presence of DNA damage.

Authors:  Binyan Liu; Qizhen Xue; Yong Tang; Jia Cao; F Peter Guengerich; Huidong Zhang
Journal:  Mutat Res Rev Mutat Res       Date:  2016-04-07       Impact factor: 5.657

9.  Regulation of single-stranded DNA binding by the C termini of Escherichia coli single-stranded DNA-binding (SSB) protein.

Authors:  Alexander G Kozlov; Michael M Cox; Timothy M Lohman
Journal:  J Biol Chem       Date:  2010-04-01       Impact factor: 5.157

10.  Dynamic structural rearrangements between DNA binding modes of E. coli SSB protein.

Authors:  Rahul Roy; Alexander G Kozlov; Timothy M Lohman; Taekjip Ha
Journal:  J Mol Biol       Date:  2007-04-05       Impact factor: 5.469

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